Manis javanica (Malayan pangolin): 108395544
Help
Entry
108395544 CDS
T06054
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108395544 (DDX20)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108395544 (DDX20)
Spliceosome [BR:
mjv03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108395544 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
108395544
NCBI-ProteinID:
XP_036861303
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MAQAFEGPEAVATLETAMPAERAAAQHSVPAPNPRAVRSLQTAHDVGGPRTRTGDVLLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKIFEEKVQHL
QELFSRIPFNQALVFSNLHSRAQHLADVLSSKGFPAECISGNMNQSQRLDAIAKLKQFHC
RVLISTDLTSRGIDAERVNLVVNLDVPLDWETYMHRIGRAGRFGKKTCFFFFLLFLLFYF
YFCYHHSENAGLEQLKNSNTFYSFYVDPIPPGLMEECLDWDVEVKAAMHSYGLASVPTQP
QIQKIERTFQNQKAHGNHIASSGNTSVSALSVKSKHNTKQKLPVKSHSECGVTEKIPPKE
LSSAIQLEEQMKNPVQTSVENSTNSHHQVKEALPVSLPKIPCLSSFKFHLPCTLTFAELV
EDYEHYIKEGLEKPVEIIRHYIGAGEQTVNPQNGFVRNRVTEESVQILASSQSGDSESDS
DSYSSRTSSQNKGNKSYLEGSSDTQPKDSVSALMDGHISLEQPLNGNDTPNLEYQESTEI
QIKARHEEGASQRAKQSRRNLPRRASYQLQSEPQEDGWYDCHRETHPSFSDTYQNYEEYW
RAYYRAWQENYAAASQSYYCNAQRHPSWMAAYHMNTIYLQEMMRGNQ
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggcgtttgaaggccctgaggcggtagcgacgttggagacagctatgccggcg
gagcgtgcggctgctcagcactcggtcccggcgccaaaccccagggccgtgcggagcctg
cagaccgctcacgacgtcggcggcccgcgaacccgcacgggggacgtgctgctggcggaa
ccggcggacttcgagtcgctgctgctgtcgcggccggtgctggaggggctacgggcggcc
ggcttcgagcggccctcgcccgtgcagctcaaggccatcccgctggggcgctgtgggctt
gatttaattgttcaagctaagtctggcactgggaaaacctgtgtattctccaccattgct
ttggactctcttgttcttgaaaacttaagtacccagattctgatcttggctcctacaaga
gaaattgctgtacagatacattctgttatcacagccattggaataaaaatggaaggccta
gagtgtcatgtctttattggagggactccattatcacaagacaaaactagacttaaaaag
tgtcatattgctgttggatctcctggcagaattaaacaactgatagaacttgactacttg
aacccaggcagtatacgtctctttattcttgatgaagcagataagcttttagaagaaggc
agcttccaggagcaaataaattggatttattcttctttgcctgccagtaaacagatgttg
gccgtatcagctacttaccctgaatttttggctaatgctttgacaaagtacatgagagag
cccacttttgtaagactaaattccagtgacccaagtctcataggtttgaagcagtattac
aaagttgtcaattcataccctttggcacataagatttttgaggagaaggttcagcattta
caggaactgttcagcagaattccatttaatcaagccttagtcttttctaatttgcacagc
agagcacagcatttggctgatgtcctttcttctaaaggctttcctgctgagtgcatttca
ggcaacatgaatcagagtcagcgtcttgatgctatagctaaactgaagcagtttcactgc
agagtcctcatttccacagatttgacttcccgtggaattgatgcagagagggtgaatctg
gttgtaaatctggacgtaccattggattgggagacctatatgcatcggattggcagagct
ggccgttttggtaaaaaaacttgcttctttttctttttattatttttattattttatttt
tatttttgctatcatcactcagaaaatgctggtctagagcagctcaagaattctaatact
ttttattccttttatgtagatcccattcctcctggtctgatggaagaatgtttggactgg
gatgtggaagttaaagctgctatgcattcatatggcttagcaagtgtacctacccagccc
caaattcaaaaaatagagagaacctttcaaaatcagaaagctcatggtaaccacattgct
tcatctggaaatacttctgtatctgcactatcagtcaaatcaaagcataataccaaacag
aagcttcctgtgaaaagtcactcagagtgtggagtcacagaaaaaataccaccaaaagaa
ctgagctctgccatacaattggaagagcaaatgaagaatcctgttcagacttcggttgaa
aactctaccaacagtcatcaccaggtcaaagaagctttacctgtgtcactccccaaaatt
ccttgtctgtcttcctttaaattccatctgccttgcactttgacttttgcggaattggta
gaagactatgaacactatattaaggaggggttagagaaacctgtggaaattatcaggcac
tacataggtgcgggggagcagactgtgaaccctcaaaacggttttgtgagaaatagagtt
actgaagagagtgtgcagatattggcaagtagtcagtctggcgactctgagagtgacagt
gattcttatagctcaaggacttcctcccagaacaaaggaaataagtcatacttggagggt
tcttctgacactcagccgaaagactcggtatcggctcttatggatggccatatttctctg
gaacagcctctgaatggaaatgacacccctaatcttgagtatcaggaatcaactgaaatc
caaataaaggcaaggcatgaagagggcgctagccagagagctaagcagagccggagaaac
cttcccaggcgagcttcttatcaattgcagtcagaaccccaggaggatggttggtatgac
tgccatagggaaacacacccaagtttttctgatacctatcagaattatgaggagtactgg
agagcttactacagggcatggcaggaaaactatgctgctgcctctcagtcgtattattgc
aatgctcaaaggcatccaagttggatggcggcctatcacatgaataccatttatctacaa
gaaatgatgcgtggcaaccagtga
DBGET
integrated database retrieval system
