Manis javanica (Malayan pangolin): 108395632
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Entry
108395632 CDS
T06054
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mjv03016
]
108395632 (TRUB1)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
108395632 (TRUB1)
Transfer RNA biogenesis [BR:
mjv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108395632 (TRUB1)
Prokaryotic type
108395632 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
108395632
NCBI-ProteinID:
XP_017513562
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MAAAEAAVVSPSSLKTDTAATPETAGTAAATAATSPAMGAVAAVTAAARTGSEARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVIGIGRGTKMLTSMLSGSKRYVAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTRQGPFTLEEHALPEDRWTIGDI
AQSLEHCSSLLPAELALKKSKSEESNGQVLSCECVTLNETKGEDDIIKTF
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcagtggtgtcgccgtcgtctttgaaaacagacacagctgca
actcctgaaactgcaggaacagccgcagcgacggctgccacctcgccagcgatgggtgcg
gtggcggcggttacggccgctgccaggaccggatccgaagctagggtctccaaggccgct
ttggctactaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgcct
tctccagaatggaccaagaggaaaaaacagactttgaaaattggacacggagggactcta
gacagcgcagcccgaggagttctggtgattggaattggaaggggaacaaaaatgttgacc
agtatgttgtctgggtccaagaggtatgttgccattggagaattgggtaaagctaccgac
acgttagattctacagggaaagtaacagaagaaaaaccttacgataaaataacacaagaa
gatattgaaggcattctgcagaaatttactgggaatataatgcaagtacctcccctctat
tccgcattaaagaaagatgggcagagactttcaactttgatgaagagaggtgaagtagtg
gaagcaaaacctgccaggccagtgacagtatacagtctctcccttcaaaaattccagcca
ccgtttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagt
gacattggcaaagaactctcttcctgcgccaatgtgctagagctgacccgaaccagacag
gggccgttcacactagaggagcacgccctccctgaagacagatggacgatcggtgacatt
gcacagtctcttgagcattgttcatctcttctcccagcagagttggctcttaaaaaatca
aaatctgaggagtctaatggacaagttttgagctgtgaatgtgtaactctaaatgaaaca
aagggagaagatgatataattaagacattctaa
DBGET
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