Manis javanica (Malayan pangolin): 108395964
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Entry
108395964 CDS
T06054
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mjv03009
]
108395964 (DDX56)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108395964 (DDX56)
Ribosome biogenesis [BR:
mjv03009
]
Eukaryotic type
Pre-60S particles
Helicases
108395964 (DDX56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
108395964
NCBI-ProteinID:
XP_036846887
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MADPVVLGFEHMGLDPRLLQAITDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YALPMLQLLLRRKATGPAVEQAVRGLVLVPTKELARQAQSMIQQLAAYCARDIRVANVSA
TEDAASQRAVLMEKPDVVVGTPSRILNSLQQDSLKLQDSLELLVVDEADLLFSFGFEEEV
KSLLCHLPRIYQAFLMSATFNEDVQVLKELVLHNPVTLKLQESQLPGPDQLEQFQVVCGT
EEEKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPTCVLNGELPLHSRCHI
ISQFNQGFYDCVIATDAEVLGAPVKGRRRGKGPKGDRASDPEAGVARGIDFHHVCAVLNF
DLPLTPEAYIHRAGRTARANNSGIVLTFVLPAEQFHLGKIEEILSGEDGTPVLLPYQFCM
EEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSERLKVRQGPVVGCSYRPLARGVG
DGPPVAAGELDCLPTAGTHPRCNCYAQLWVGAGQPGTGQCAQAMSLPVPPALRSLIHPHK
KRKKLSSKKAKKAKTQNPLRSFRHRREGHRPTAAPS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccggtggtgttgggattcgaacacatgggtctggacccccggctcctgcag
gccatcaccgacctgggttggtcgcgacccacactcattcaggagaaggccatcccactg
gccttggaagggaaggacctcctcgcccgagcccgcacgggctcggggaagacggccgcc
tatgcccttccgatgctgcagctgctgctccgcaggaaggcgacaggccctgcagtagag
caggctgtgagaggtcttgtgcttgtgcccaccaaggaactggcacggcaggcccagtcc
atgattcagcagctggctgcctactgtgctcgagacatccgggtggccaatgtctcagcc
actgaagatgcagcctctcagagagctgtgctgatggagaagcctgatgtagtggtgggg
accccgtctcgaatcttaaacagcctgcagcaagacagcttgaagctgcaagactccttg
gagctgctggtggtggatgaggctgatcttcttttctcctttggctttgaggaggaggtc
aagagtcttctctgtcatttgccccgaatttaccaggcttttctgatgtcagctactttt
aatgaagatgtacaagtgctcaaggagctggtactgcataacccggttaccctcaagcta
caggagtcccagctgccagggccagaccaattagagcagtttcaggtggtctgtggaaca
gaggaggagaagtttctgttactgtatgccctactcaagttgtctttgattcggggcaag
tctcttctctttgtcaacactcttgagcggagctaccggctgcgcctgtttttggagcaa
ttcagcatccccacctgtgtgctcaatggggagcttccactgcactccagatgccacatc
atctcacagttcaaccaaggcttctacgattgtgtcatagcgactgatgccgaagtcctg
ggggccccagtcaagggcaggcgtcggggcaaaggacccaagggggacagggcatctgac
ccagaggcaggtgtggctcgtggcatagacttccaccatgtgtgtgctgtgctcaatttt
gatctcccactcacccctgaggcctacattcatcgggctggaaggacagcacgtgccaac
aactcaggcatagtcttgacttttgtgctgcccgcagagcaattccacttgggcaagatt
gaggagattctcagtggagaggatgggacccccgtgctgcttccctaccagttctgcatg
gaggagatcgagggcttccgctatcgctgcagggacgctatgcgttcggtgacaaaacag
gccattcgagaggcaagactgaaggagatcaaggaggagcttctccattcggagcggctc
aaggtgaggcaagggccagtggtgggctgcagctacaggcctctggccagaggtgtggga
gatggaccgccagtggccgcaggtgaactggattgcctccccactgctggcacacatcct
cgatgcaactgctatgcccagctctgggttggggctgggcagccgggtacagggcagtgt
gctcaggccatgtctcttccagtccctcctgctctgcgcagccttatccaccctcacaag
aagcggaagaagctatcctctaagaaggctaagaaggcaaagactcagaacccgctgcgc
agcttcaggcacagaagagagggacacagacccacagcagcgccctcctga
DBGET
integrated database retrieval system
