Manis javanica (Malayan pangolin): 108396016
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Entry
108396016 CDS
T06054
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108396016 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108396016 (BARD1)
04121 Ubiquitin system [BR:
mjv04121
]
108396016 (BARD1)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108396016 (BARD1)
03400 DNA repair and recombination proteins [BR:
mjv03400
]
108396016 (BARD1)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
108396016 (BARD1)
Ubiquitin system [BR:
mjv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108396016 (BARD1)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108396016 (BARD1)
DNA repair and recombination proteins [BR:
mjv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
108396016 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
zf-C3HC4
ANK_LRRK2
zf-C3HC4_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
108396016
NCBI-ProteinID:
XP_036872434
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MLQNRQPRVRSGNEPRPAPAMEPADRGPWAHSRAALDRLEKLLRCSRCANILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCFTPAWVQDVKINRQLDSMIQFCSKLRNLLYGDRLSDLKE
DTTRKSLFSDADKKNSIKMWFSPRSKKIRYVVSKVTVKTQPQMTNDENAQQASVYEFIST
SPSADVSERAKKSTTRSRKKQKKKTLAEINQKWNVETERKDGELDSKEEFKEKLVSFCSQ
PSVIATSQINGEIDLLASGSVTESECFGHLTEVSLPLAEQIQSPEIESRNEVVTPKKNIC
ENDLTSKKSLPLGHGKCGRRIRLSSPTSKRRRSVSPSTSGNFVKQTVLSENIALPGCSSS
LSSKLKVGDTLRRRNSNISDESISLSPGIPPSTLNSPSYRRMMSSPSAMKLLPSSLRGVK
RNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLEVVELLLKH
KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYRASRNAVNIFGLRPVDYANNENMKSLL
LLPENESSSTSHCPVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKVKKCAEFDSTV
THVIVPGDTVQSTLKCMLGILSGCWILKFEWVKACLQSKECEQEEKYEIPKGPQKSRLNR
EQLLPKLFDGCYFYFGGTFKHHPKDNLTKLVAAAGGQILSRKPKPDSDVTQTINTVAYHA
KPDSDQRFCTQYIIYEDLSNHRPERARLGKVWMAPSSWFIDCVMSFELLPLDI
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaaccggcagccgagggtccgctccgggaacgagcctcgtcccgcgcccgcc
atggagcctgccgatcgcgggccctgggcccacagccgcgccgcgctcgaccggctggag
aagctgctgcgctgctctcgctgtgctaatattctgagggagcctgtgtgtttaggagga
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaactggatgtcccgtg
tgttttaccccagcctgggtacaagatgtgaagataaatagacagttggacagcatgatc
cagttttgtagtaaacttcgaaatttgctgtatggcgacaggctttcagatttgaaagaa
gatacaactaggaaaagtttatttagtgatgcagataagaagaattcaataaaaatgtgg
tttagtcctcgaagtaagaagatcagatatgttgtaagtaaagtcacagtgaaaacccag
cctcaaatgacaaatgatgaaaatgctcagcaggcctcagtctatgaatttatttctaca
agtccttcagcagatgtttctgagagggctaaaaagtctactaccagatctagaaaaaag
caaaaaaagaaaaccttagctgaaattaaccagaaatggaatgtagagacagaaagaaaa
gatggtgaacttgactccaaagaggaatttaaggaaaagttagtatctttctgtagccaa
ccatctgttattgctacttctcagataaatggtgaaatcgacttactagcaagtggctct
gtaacagaatctgaatgttttggacacttaactgaagtttctttaccattggccgagcaa
atacagtctccagagattgaaagcaggaatgaagtagtgactcctaagaagaatatctgt
gaaaatgatcttacatctaagaaatccttgccactaggtcatggaaaatgtggacgtcgc
atcagactttccagtcccacttctaagagacgtagaagcgtctctcccagcaccagtgga
aattttgttaagcaaacagtgctctcagaaaacatagcactgcctggctgttcttcatca
ctttcaagcaaacttaaagttggtgacacattaaggaggagaaacagtaatatatcagat
gaatccattagcctttcaccaggtataccaccttctacactgaatagtccaagttacaga
cgaatgatgtctagtccttcagcaatgaagcttttgcccagtagccttaggggtgtgaaa
agaaatcatagaggagagactctgctgcatattgcttccattaagggcgacataccttct
gtggaatacctcttacagaatggaagcgatccaaatgttaaagaccatgctggatggaca
ccactgcatgaagcctgcaatcacgggcacctggaggtggtggaattgctgctcaagcac
aaggcattggtgaacaccactgggtaccagaatgactcaccacttcatgatgcagccaag
aatgggcacgtggatatcgtcaagctgttactttcctatagagcctccaggaacgcagtt
aacatatttggtttgcggcctgtggattatgcaaacaatgaaaatatgaaatcgctattg
ctgctaccagagaatgaatcatcatcaactagccactgcccagtaatgaacactggtcag
cgtagggatggacctcttgttcttataggcagtgggctttcttcagaacaacagaaaatg
ctcagtgagcttgcagcaattcttaaggttaaaaaatgtgctgagtttgatagtacagta
actcatgtcattgttcctggtgatacagttcagagtactctgaaatgtatgcttggaatt
ctcagtggatgctggatcttaaaatttgagtgggtgaaggcatgtctacaaagcaaagaa
tgtgaacaggaagaaaagtatgaaattcctaaaggaccacagaaaagcaggctcaacaga
gaacagctgttgccaaagctgtttgatggatgctacttctactttgggggaaccttcaaa
caccatccaaaggacaaccttactaaacttgtcgctgcagctggggggcagatcctcagt
aggaagcccaagccagacagtgatgttactcaaaccatcaatacagtcgcgtaccatgcc
aaacccgactctgatcagcgcttctgcacacagtatatcatctatgaggatttgtctaat
catcgcccagagagggctcggctggggaaagtctggatggctccttccagctggtttata
gattgtgtgatgtccttcgaattgcttcctcttgacatctga
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integrated database retrieval system
