Manis javanica (Malayan pangolin): 108396162
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Entry
108396162 CDS
T06054
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X2
KO
K14407
cleavage stimulation factor subunit 2
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108396162 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108396162 (CSTF2)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
108396162 (CSTF2)
U7-dependent histone pre-mRNA processing factors
108396162 (CSTF2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108396162
NCBI-ProteinID:
XP_017514390
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Position
X:91767238..91792525
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AA seq
626 aa
AA seq
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MAGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLIAGNPQQVHGAGPGSGSNVSVNQQNPQAPQAQSLSGMHVN
GAPHLMQASMQAGIPAPGQLPASVTGPGPGSLAPGGGIQAQVGMPGSGPVSMERGQGALQ
HSPVGPAGPASIERVQGQRTWMIWASVRGCTPSLLVSGGLDGIAVLPMQDPRAAMQRGPL
PANVPTPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHVPGHDSRGPPPHE
MRGGPLAEPRPLMAEPRGPMLDQRGPPLDGRGGRDPRGMDSRGMEARAMEARGLDARGLE
ARAMEARAMEARVMEARVMEARAMEVRGMEARSMDTRGPVPGPRGPIPSGIQGPSPINMG
TVGPQGSRQVSVMQGAGMQGTSIQGGGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQ
IAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgactgtgagagaccctgcggtggatcgttctctacgctcggtgttcgtg
gggaacattccctatgaggctactgaagagcaattaaaagacatcttttctgaggttgga
cctgttgttagtttcaggttggtatatgatagggagacaggaaagccaaagggttatggc
ttctgtgaataccaagaccaagagacagcacttagtgccatgcgaaacttgaatggacgt
gaattcagtgggagagcacttcgggtggacaatgctgccagtgaaaagaacaaagaagag
ctgaaaagccttggcactggtgcccctgtcattgagtcaccttatggagagaccatcagt
cctgaggatgcccctgagtccattagcaaagcagttgctagtcttccaccagagcagatg
tttgagctgatgaaacaaatgaagctctgtgtccagaatagtccccaggaagcacggaac
atgttacttcagaaccctcagctggcttatgctttgctgcaagcacaggtagtgatgaga
attgtggatccagagattgccttgaaaattctgcatcgacagacaaatatcccaacgctg
attgcaggcaaccctcagcaagtgcacggtgctgggcctggctcaggatctaatgtgtca
gtgaaccagcagaatcctcaggcccctcaagcccagtctttgagtggaatgcacgtcaat
ggtgcacctcatctgatgcaagcttctatgcaggctggaattccagcaccagggcaatta
ccagcttctgtaacaggacctggccctggttccttagctcctggaggaggaattcaggcc
caggttgggatgccaggaagtggaccagtgtccatggagcggggacaaggagctctacag
cactcacccgtgggacctgccgggcctgcatcaattgagcgtgttcaagggcagagaaca
tggatgatatgggcatctgtccgaggctgtactccctccctactggtgtcaggaggcttg
gatggaatagcagtcttgccgatgcaagaccccagagcagctatgcagcgtgggcccttg
cctgccaacgtcccaactcctcgaggcctgttaggggatgctccaaatgacccccgtgga
ggcactttactttctgtaactggagaggtagagccaagaggttacctaggaccccctcac
cagggtccacccatgcaccacgtccctggccatgacagccgtggcccacccccacatgag
atgaggggagggccattagctgagcccaggcctctcatggctgagccaagaggacccatg
ctagatcagaggggtccacccttggatggcagaggcggaagagatccccgaggcatggat
tcacgagggatggaggcacgagccatggaggcaagaggattagatgccagaggattggaa
gcacgtgcaatggaagcccgagcaatggaggcccgtgtgatggaggcccgtgtgatggag
gcccgtgcgatggaagtcagggggatggaggccagaagcatggacacaagaggcccagtc
cctggccctagaggccctatacctagtggaatccagggtcccagtccaattaacatgggg
acagttggcccccagggatccagacaggtctcagtcatgcagggagcaggcatgcaagga
acaagcattcagggtggaggacagcccggtggctttagtcctggccagagccaagtcact
ccacaggaccacgagaaggctgctttgatcatgcaggttcttcagctgactgcagaccag
attgccatgctgcctcctgagcagaggcagagtatcctgatcttaaaggaacaaatacag
aaatccactggagcaccttga
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