Manis javanica (Malayan pangolin): 108396419
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Entry
108396419 CDS
T06054
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108396419 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108396419 (PAN3)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108396419 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
108396419 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
Motif
Other DBs
NCBI-GeneID:
108396419
NCBI-ProteinID:
XP_036859834
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MNCGGGLPPPSAAASSSSSSLAAAAAAVVAPPGVGGVPGGAAAGVKLKYCRYYAKDKTCF
YGEECQFLHEDPAAGAAPGLGLHSNSVPLALAAAPGTGFPPGAVPGGGTGPPPGPKKPDL
GGPGAGAAAGGGGSSGALDGPRLAIPGIDGGALTDTSLTDSYFSTSFIGVNGFGSPVETK
YPLMQRMTNSSSSPSLLNDSAKPYAGHDALTSPASSLFNDFGALNISQRRKPRKYRLGML
EERLVPMGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGS
TSRLSNVSQSNMSAFSQVFSHPSTGSPAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRR
RSHTPNPANYLVPSSASAPVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMRSF
KNYHRTACRTEGQIIEVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLIT
MAQIDQADMPAVPTEVDSYHSLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCL
RRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMS
RHFNDPNADAYFTKRKWGHLDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTTGLACRV
MDPTKILVTGKTRLRVNCVGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACN
SLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAA
QMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFH
QVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELI
AAANALFMVLYTGYTETLFRR
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtggcggcggcctcccgcccccctcggccgccgcctcctcttcctcctcctcg
ctggcggcggcggcggcggcggtcgtggccccgccgggggttgggggcgtccccggcggg
gcggcggcgggagtgaagctgaagtactgccgctactacgccaaggataagacctgcttc
tacggggaggagtgtcaattcctgcacgaggacccggccgccggggctgccccgggcctc
ggcctccatagcaacagcgtccccctggctctggcggccgcgcccgggaccggctttcca
cccggagcggtcccgggcggggggaccgggccgcccccggggcccaagaagccggacctg
gggggcccgggagctggagctgcagccggcggaggaggcagcagcggagcgctcgatgga
cctcggctggcgattcctggaatagacggaggtgctttaactgataccagtctcacagat
tcctatttcagcaccagctttattggagtcaatggatttggaagccctgtggaaacaaag
tatcccttaatgcagcgaatgactaatagtagcagctccccaagccttctaaatgacagt
gccaagccatatgcaggccatgatgctctaacttcacctgcttcatccttgtttaatgac
tttggtgccctcaacatctctcagagaagaaagccaaggaagtatcgcctggggatgctg
gaagagaggctagttccgatgggatcaaaggcacgaaaagcaaagaaccctattggctgc
cttgctgacaggtgtaaatcaggagtacccatcaatatggtttggtggaacagagtcaca
gaaaacaatttacagacaccaaatcctactgcaagcgagtttattcctaaaggaggatca
acctccaggctgagtaatgtgtcccagtcaaatatgtctgccttctctcaagttttctct
cacccatccacgggaagtcctgctgctgctggattagcaccaggaatgtcactgtcagcc
ggatcttcccctcttcattctcccaagatcactccgcacacttctcctgctcccagaaga
agaagtcacactccaaacccagcaaattacctggtgccttctagtgcgtctgcacctgtc
aataatcctgtttcccagactccgtcttccggtcaggtgatccaaaaggaaaccgttggt
gggacaacttacttctatacagacacaaccccagcacccctgactggaatgagatctttc
aaaaattatcacagaacagcttgccgaacagaaggtcaaataattgaggtatttccaaat
tatcatatttaccctccaactgcacctcatgttgcttatatgcaaccaaaagcaaatgca
ccttccttcttcatggccgatgaactccgacaggagctgataaacagacatttaataaca
atggctcaaattgatcaagcagatatgccagcagtccctacagaagtggacagctaccat
agcctgttccctctagaaccactgccaccacccaaccggatacagaaatcaagtaatttt
ggatatatcacatcttgctacaaagctgtaaatagcaaagatgatctgccatattgcctt
cggaggatacatggtttccgtcttgttaacacaaagtgcatggtgttggttgatatgtgg
aaaaaaattcagcactcaaatattgtaacgttgcgtgaagtgttcaccactaaagcattt
gcagagccttctcttgtgtttgcatatgattttcatgctggaggagaaacaatgatgagc
agacactttaatgaccctaatgctgatgcctatttcacaaagagaaagtggggtcacctt
gatggcccattgcccagacagcatgctgggttattgccagaatctctcatttgggcgtat
attgtccagttgagttctgcactgcgaaccattcatacgacaggtttggcttgtcgagtt
atggacccaacgaagattctggtaactggcaaaacgaggttacgagtaaattgtgttgga
gtttttgatgtcttaacatttgataacagtcagaataataatccactggctttaatggct
caataccagcaagcagatctgatatcattaggaaaagttgtgttggctttggcttgcaac
tctttggcaggaattcagcgagagaatttacagaaagccatggaactggtgacaatcaac
tactcctctgacctgaagaatctgattttgtacttgttgactgaccaaaacaggatgcgg
agtgtaaatgacatcatgcccatgattggtgctcgattttatactcagttggacgctgct
caaatgagaaatgatgtcatagaagaagatcttgcaaaggaggttcaaaatggaagactg
tttagacttctagcaaaattgggaacaatcaatgagaggccggagtttcagaaggatcct
acctggtcagagactggagaccgttacctgttgaaactctttagggatcatctttttcat
caggtgacagaagcaggtgctccttggattgacctcagtcatatcatttcttgtcttaac
aagttagatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgta
cttgtggtgacttacagtgacttgaagcgctgctttgaaaatacttttcaagaactgatt
gcagctgcaaatgctttatttatggtactttacactggatacacagagacactgttcaga
agatga
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