Manis javanica (Malayan pangolin): 108396775
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Entry
108396775 CDS
T06054
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04659
Th17 cell differentiation
mjv04710
Circadian rhythm
mjv05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
108396775 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
108396775 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
108396775 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjv03000
]
108396775 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mjv03310
]
108396775 (RORC)
Transcription factors [BR:
mjv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108396775 (RORC)
Nuclear receptors [BR:
mjv03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
108396775 (RORC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
GDH_HM2
Motif
Other DBs
NCBI-GeneID:
108396775
NCBI-ProteinID:
XP_017515252
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MPPSLTGAAGCQEDSHLCTLSLDHPLLRRTGSGKAHSSVMRTQIEVIPCKICGDKSSGIH
YGVITCEGCKGFFRRSQQCNAAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVK
FGRMSKKQRDSLHAEVQKQLQQQRQEQVAKTLRAGGQGADALTCPLGLPDGQLPLGSSPD
LPEASACPPGLLRCPGSGPSFCNSLAKAKLNGASYHLEYSPERGKAEGTESFHSTGSQLV
PVRCGLHFEGPRHPGLGEPGQGPDSYCSPSFHSTPGAPYASLTETEHLVQNVCKSYRETC
QLRLQDLLCQRTNVFSREEVAGYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELC
QNDQIVLLKAGAMEVVLVRMCRAYNADNHTVFFEGKYGGMELFRALGCSELISSIFDFSR
SLSALRFSEDEIALYTALVLINANRPGLQEKRKVEQLQYNLELAFHHHLHKTQRQGILAK
LPPKGKLRSLCSQHVEKLQTFQHLHPIVVQDAFPPLYKELFSAETELPEGLSK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgagcctcacaggagctgctggctgccaagaagactcacacctctgcacccta
tccctggaccaccccctgctgagaaggacagggagcggcaaagcccacagctcagtcatg
agaacacaaattgaagtgatcccttgcaaaatctgtggggacaagtcatctgggatccac
tatggggttatcacgtgtgaggggtgtaagggcttcttccgccggagccagcagtgtaac
gcggcctactcctgcacccgccagcagaactgccccatcgatcgcactagccgaaaccgc
tgccagcactgccgtctgcagaagtgcctggcactgggcatgtctcgagatgctgtcaag
tttggccgaatgtccaagaagcaaagggacagcctgcatgctgaagtgcagaaacagctg
cagcagcagcggcaggagcaagtggccaagaccctacgtgcagggggccaaggagctgac
gccctcacttgccccttggggctacccgacgggcagctgcccctgggctcctcgcctgac
ctgcctgaggcctctgcctgtcctcctggtctcctgagatgcccaggctccgggccctcc
ttctgcaacagcttggccaaggccaagctcaatggggcctcataccacctcgaatacagc
cctgagcggggcaaggctgagggcacagagagcttccatagcacaggcagccagctggtg
cctgtcagatgtggacttcattttgagggccccaggcatcctgggcttggggaaccagga
cagggaccagacagctactgtagccccagtttccacagcaccccaggggcaccttatgcc
tccctgacagagacagagcacctggtgcagaacgtttgcaagtcctaccgagagacatgt
cagctgcggctgcaggaccttttgtgtcagcgcaccaacgtcttctcccgggaggaggtg
gctggctaccagaggaagtccatgtgggagatgtgggaacgctgtgcccaccacctcaca
gaggccattcagtacgtggtggagttcgcaaagaggctctcaggctttatggagctctgc
cagaatgatcagatcgtgctactcaaagcaggagcgatggaagtggtgctggtcaggatg
tgccgggcctacaatgctgacaaccacacagtcttttttgaaggcaaatacggtggcatg
gagctgttccgcgccttgggctgcagcgagctcatcagctccatctttgacttctcccgt
tccctgagtgccttgcgcttttccgaggatgagatcgccctctacacagcccttgtcctt
attaatgccaaccgaccagggctccaggaaaaaaggaaagtagaacagctgcagtacaac
ttggagctggccttccatcatcatctccacaagactcagcgccaaggcatcctggcaaag
ctgccacccaaggggaagcttcggagcttgtgtagccagcatgtggagaagcttcagacc
ttccagcatctccaccccatcgtggtccaagatgctttccccccgctctacaaggaactc
ttcagcgctgaaactgagttgcctgaggggctgtccaagtga
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