KEGG   Manis javanica (Malayan pangolin): 108396865
Entry
108396865         CDS       T06054                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108396865 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mjv03041]
    108396865 (SF3A1)
Spliceosome [BR:mjv03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108396865 (SF3A1)
 Complex B
    108396865 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    108396865 (SF3A1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 108396865
NCBI-ProteinID: XP_017515405
LinkDB
Position
15:complement(82611634..82629251)
AA seq 792 aa
MPAGPVQAVPPPPPAATEPKQPTEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QAAQQQLPQKVQAQVIQESIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQF
LTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVLD
QVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTP
EELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPSQLDQDTQVQDMDEGSDD
EEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIP
ASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEE
TAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDT
KEKIGPSKPNEIPQQPPALSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRPP
MASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAPV
PAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEDEFLRRNKGPVSIKVQVPNMQDKTEWK
LNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAII
HLALKERGGRKK
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgccggccgggcccgtgcaggcggtgcccccgccgccgcccgcggccaccgagcctaaa
cagcccacagaagaagaagcatcttcaaaggaggattccactccttccaagccagtggtg
gggataatttaccctcctccggaggtcaggaatattgttgacaagaccgccagctttgtg
gccagaaacggacctgaatttgaagctaggatacggcagaacgaaatcaataaccccaag
ttcaacttcctgaaccccaacgacccttaccatgcctattaccgccacaaggtcagcgag
ttcaaggaggggaaggctcaggagccctcagccgccatccctaaggtcatgcagcagcag
caggccgcacagcagcagctgccccagaaggtccaagctcaggtgatccaagagagcatt
gtgcccaaagaaccccctcccgagtttgagttcatcgcagaccccccttccatctcagcc
ttcgacctggatgtggtgaagctgacggctcagtttgtggcaaggaatggacgccagttc
ctgacccagctgatgcagaaagagcagcgcaactaccagtttgacttcctccgcccacag
cacagtctcttcaactacttcacgaagctggtggaacagtataccaagatcttgattccg
cctaaaggattatttacaaagctcaagaaagaggctgagaatcctcgagaagtcttagac
caggtgtgttaccgagtggagtgggccaagttccaggagcgcgagaggaagaaggaagag
gaggagaaggagaaggagcgggtggcctatgcgcagatcgactggcatgattttgtggtg
gtggaaacggtggacttccaacccaatgagcaagggaacttcccaccccccaccaccccg
gaggagctcggggcccgcatcctcatccaggagcgctacgagaagttcggggagagtgag
gaggtcgagatggaggttgagtctgatgaggaagacgagaaacaggagaaggcagaggag
cctccttcccagctggaccaggacacccaagtgcaagacatggatgagggttcagatgat
gaagaagaagggcagaaagtacccccacccccagagacaccgatgcctccacctctgccc
cccactccagatcaggtcattgtccggaaggactatgaccccaaagcttccaagcccctg
cctccagcccctgctccagatgagtatcttgtgtcccccatcacgggagagaagatccct
gccagcaaaatgcaggaacacatgcgcattggtcttcttgacccccgctggctggagcag
cgagatcgctccatccgtgagaagcagagtgatgatgaagtgtatgcaccaggtctggat
attgagagcagcttgaaacagttggctgagcggcgtactgacatcttcggtgtggaggaa
acagccatcgggaagaagattggtgaggaggagatccagaagccggaggagaaggtgacc
tgggacggccactctggcagcatggcccgcacccagcaggctgcccaggccaatatcacc
ctccaggagcagattgaggccatccacaaggccaagggcctggtgccggaagatgacacc
aaggagaagatcggccccagcaagcccaatgagatcccccagcagcccccagctctgtct
tcagccaccaacattcccagctcggccccacccatcacctctgtgccccggccccctgcc
atgccaccacctgttcgtaccacagttgtgtctgcggtacctgttatgccccgaccccca
atggcatcagtggtccgtctgcccccaggctcagtgatcgcccctatgccacctatcatc
catgcaccgaggatcaatgtggtgcccatgcctccctcggcccctcctatcatggcaccc
cgcccaccacccatgattgtgccaacagcctttgtgcctgctccccctgtggcccctgtg
ccagctccagccccaatgccccctgtccacccaccacctcccatggaagatgagcctacc
tctaagaaactgaagacagaagacagcctcatgcctgaggacgagttcttacgcaggaac
aagggtccagtgtctatcaaagtccaagtacccaacatgcaggataagacagaatggaaa
ctgaatggacaggtgctggtcttcaccctcccactcacagaccaggtctctgtcatcaaa
gtgaagattcatgaagccacgggtatgcctgcagggaaacagaagctacagtatgagggc
atcttcatcaaggattccaactcgctggcttactacaacatggccaatggtgccatcatc
cacctggccctcaaggagagaggcgggaggaagaagtag

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