Manis javanica (Malayan pangolin): 108396967
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Entry
108396967 CDS
T06054
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108396967 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjv03021
]
108396967 (TAF5)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108396967 (TAF5)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108396967 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
108396967 (TAF5)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108396967 (TAF5)
STAGA complex
108396967 (TAF5)
TFTC complex
108396967 (TAF5)
SAGA complex
108396967 (TAF5)
SLIK complex
108396967 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
VPS8_N
Late_protein_L2
PROPPIN
Motif
Other DBs
NCBI-GeneID:
108396967
NCBI-ProteinID:
XP_017515589
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLIPPQAGDGAGEGGGGTTNNGPNGSGGNVKAASSAGGD
GGTPKPSVAVSAVAPAGAAPVPAAAPEAGAPHDRQTLLAVLQFLRQSNLREAEEVLRREA
RLLEEAVAGSGVPGEVDGAGAEAASTLLSRVTASAPGPAAPDPPGAGASGAAAVSGLATG
PAAPGKVGNVAVEDQPDVSAVLSAYSQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTKFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagcctgagggaccg
ccgacgctgatacctccgcaggcgggggacggcgctggcgagggtggcggcggcactacc
aacaacggccccaacggcagcggtgggaacgttaaggcggcgtcgtcggctggcggggat
ggtgggacccccaaaccctcggtggctgtctcagccgttgccccagcgggggcggccccg
gtgcccgccgctgctccggaggcaggtgctccccacgaccgacagactttgctggccgtg
ctgcaattcctacggcaaagtaaccttcgcgaagccgaagaggtgctgcgccgtgaggcc
cggctactggaggaggcagtggcgggctccggagtccccggagaggtggacggcgccggc
gctgaggcagctagcacgctgcttagccgggtcacagcctcggcccccggccctgcggcc
cccgaccctcccggtgccggcgcgtctggggccgccgctgtctcgggcttagcgacaggt
cctgcggctccagggaaagttggaaatgtagctgtggaagaccagccagatgtcagtgct
gtgctgtcagcctacagccaacaaggagacccaacaatgtatgaagaatactatagtgga
ctgaaacacttcattgaatgttccttggactgccatagggcagaattatctcaactcttt
tatcctctctttgtacacatgtacttggaactagtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagagcca
gaaattgaggtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaaacct
aaaaagaagaaacctaaaaaagatagtattggatccaaaagcaaaaaacaagatcccaat
gctccacctcaaaacagaatccctcttcctgagttgaaagattcagataagttggataag
ataatgaatatgaaagaaaccaccaaacgagtgcgccttgggccagactgtttaccctcc
atttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcactgat
gattctagtttgattgctggaggttttgcagattctactgtcagagtgtggtctgtaaca
cccaaaaagcttcgtagtgttaaacaagcagcagatcttagccttatagacaaagaatca
gatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtat
ggtcacagtgggcctgtctatggagccagcttcagtccagataggaactacctgctttcc
tcgtcagaagatggaactgttagattgtggagtcttcaaacatttacttgcttggtggga
tataaaggacacaactatccagtatgggacacacagttttctccatatggatattatttt
gtgtcagggggccatgaccgagtagctcggctttgggctacagaccattatcagccttta
aggatatttgctggccatcttgctgatgtgaattgtaccaaattccatccaaattctaat
tatgttgctacgggctctgcggatagaactgtgaggctctgggatgtcctgaatggcaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtactcctttgggatattggacat
ggcttgatggttggagaattaaaaggccacactgatacagtctgttcacttaggtttagt
agggatggtgaaattttggcatcaggttcaatggacaatacagttcggttatgggacgct
gtcaaagcatttgaagatttagagactgatgactttactacagccactgggcatataaat
ttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacaccagtt
gtacacctccattttacacgaagaaatttggttctagctgcaggagcttatagtccacaa
taa
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integrated database retrieval system
