Manis javanica (Malayan pangolin): 108397729
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Entry
108397729 CDS
T06054
Symbol
SNRPA
Name
(RefSeq) U1 small nuclear ribonucleoprotein A isoform X1
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108397729 (SNRPA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108397729 (SNRPA)
Spliceosome [BR:
mjv03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
108397729 (SNRPA)
Complex B
108397729 (SNRPA)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
108397729
NCBI-ProteinID:
XP_017516760
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All DBs
Position
17:complement(12924399..12932805)
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AA seq
282 aa
AA seq
DB search
MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFK
EVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPA
SKKAVQGGAAAPVVGAVQGPVPGMPPMTQAPRIMHHIPGQPPYMPPPGMIPPPGLAPGQI
PPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV
PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcccgagacccgtcccaatcacactatttatatcaacaacctcaacgagaag
atcaagaaggatgagctgaagaagtctctgtacgccatcttttctcagtttggccagatc
ctggatatcttggtatcacggagcctgaaaatgaggggccaggcctttgtcatcttcaag
gaggttagcagtgccaccaacgccctgcgctccatgcaaggttttcccttctacgacaag
cccatgcgcatccagtacgccaagactgactcagatatcatcgccaaaatgaagggcact
ttcgtggagcgggaccgtaagcgggagaagaggaagcccaagagccaggagaccccagcc
tccaagaaggccgtgcagggtggggccgctgcccctgtagtgggagctgtccaggggcct
gtcccgggcatgccaccgatgactcaggcgccccgcatcatgcaccacataccaggccag
cctccctatatgccaccccctggcatgatcccacctccaggccttgcacctggccagatc
ccaccaggggccatgcccccacagcagcttatgccggggcagatgccacctgcccagcct
ctttcagaaaatccaccaaatcacatcttgttcctcaccaacctgccagaggagaccaac
gaactcatgctgtccatgcttttcaaccagttccctggcttcaaagaggtccggctggtc
cctgggcggcatgacattgcctttgtggagtttgacaatgaggtgcaggcaggggctgct
cgcgatgccctacagggcttcaagatcactcagaacaatgccatgaagatctcctttgcc
aagaagtag
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