Manis javanica (Malayan pangolin): 108397857
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Entry
108397857 CDS
T06054
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108397857 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mjv01007
]
108397857 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mjv03016
]
108397857 (VARS1)
Enzymes [BR:
mjv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
108397857 (VARS1)
Amino acid related enzymes [BR:
mjv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108397857 (VARS1)
Transfer RNA biogenesis [BR:
mjv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108397857 (VARS1)
Prokaryotic type
108397857 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1_2
tRNA-synt_1g
Arc1p_N_like
GST_C_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
108397857
NCBI-ProteinID:
XP_017516944
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGSGGAHPRICLQPPPTSRTPFPPPRLPAL
EQGPGELWVWGATAVAQLLWPAGLGGPGGCRAAVLVQQWVSYSDTELIPAACGATLPALG
LQSSAQDPQAALGALGRSLSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYLLDPSA
RRIWGNVTRWFITCVQQPEFRAVLGEVVLYSGARPLSQQLGPEVPAPLKSAAQLKKEAKK
REKLEKFQQKQKIQQQQPPLAEQKKTKPEKRGKRDPGIITYDLPTPPGEKKDVSGIMPDS
YSPQYVEAAWYPWWEQQGFFKPEYGRSSVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKW
KEEKGDRIYHQLRKLGSSLDWNRACFTMDSKLSVAVTEAFVRLHEEGVIYRSTRLVNWSC
TLNSAISDIEVDKKELTGRTLLSVPGYEEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIE
TMLGDVAVAVHPKDPRYQHLKGKSVINPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQN
DYEVGQRHGLEAVSIMDSRGSLVNVPPPFLGLPRFEARKVVLAALKEQGLFRGMEDNPMV
VPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLCILPEAHQRTWHAWMDNIRDW
CISRQLWWGHRIPAYFITVSDPAVPPGEDPDGRYWVSGRSEAEAREKAAKEFRVSPDKIS
LQQDEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLK
LTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVVHGVSLQGLHEQLLNSNLDPSEV
EKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
ALRGLGKGFVPSPTSEPAGHKSLVDRWILSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWL
YELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRI
PQAPPSLCITPYPEPLECSWKDPEAEATIELALSITRVVRSLRADYNLTRIRPDCFLEVA
DEATGAMASAVSGYVQALASAGVVAVLALGAPAPQGCAVALASDCCSVHLQLQGLVDPAR
ELGKLQAKRGEAQRQAQRLRERRAVSDYPVKVPMEVQEADKVKVCGLQQTEAELRKVDEA
ITLFQTMLL
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctctacgtctcccctcatccggatgccttccccagcctccgagccctcata
gctgcgcgctacggggaggctggggagggtccgggatcaggaggagcccacccccgcatc
tgtctccagccgcccccgaccagcaggactccctttcccccaccccgcctgcccgcccta
gagcaggggcccggtgagctctgggtgtggggggctacggctgtggcccagctgctgtgg
ccagcgggcctggggggcccgggaggatgccgggcggctgtccttgtccaacagtgggtc
agttactccgacaccgagctaataccagctgcctgtggggcaacgctgccagccttggga
ctccaaagctctgcccaggacccccaggccgcactgggggctctgggcaggtctctgagc
cccttggaagagtggcttcggctacacacctacctggccggggaggcccctactctggct
gacctggcggctgtcaccgcgttgctgctgcctttccgatacctcctagacccctctgcc
cgccggatctggggtaatgtgactcgctggtttatcacatgtgtccagcagccagaattc
cgggccgtgctaggagaggtggtactgtactcaggggccaggcctctctcccaacagcta
ggccctgaggtccctgcacccctgaagtcagctgctcaactcaagaaagaggcaaagaaa
cgggagaagctagagaagttccaacagaagcaaaagatccaacagcagcagccgcccctg
gcggagcagaagaaaacaaaaccagagaagagggggaaaagagatcctgggataattacc
tatgacctcccaaccccacctggggaaaagaaagatgtcagtggcatcatgcctgattcc
tacagtcctcagtatgtggaggctgcctggtacccttggtgggagcagcagggcttcttc
aagccagagtatgggcgttccagtgtgtcagcaccaaatccccggggcatcttcatgatg
tgcatcccacctcccaacgtgacaggctccctgcacctgggccatgccctcaccaatgcc
atccaggactccctgacccgatggcaccgcatgcggggggagactactctgtggaatcct
ggctgtgaccatgcgggcattgccacccaggtagtggtggaaaagaaactctggcgggag
caggggctgagccggcaccagctgggccgcgaggcctttctacaggaggtctggaagtgg
aaagaagagaaaggtgaccgcatttatcaccagctcaggaagcttggcagctccttggac
tggaatcgagcctgtttcaccatggactctaaactctcagtagctgtgacagaggccttc
gtccggctccatgaggagggagtcatctaccgcagtacccgcctcgtcaactggtcctgc
accctcaactcggccatctccgacatcgaggtggataagaaggagctgacaggtcgtacc
ctgctctctgtacctggctatgaggagaaggtggagtttggggtcctcgtctcctttgcc
tacaaggtccaaggctcagacagtgatgaggaggtggtggtggcaacaactcgaattgag
acaatgctgggagacgtggctgtggctgtgcaccccaaggaccctagataccagcacctg
aaggggaagagtgtgatcaacccattcctgtctcggagcctccctattgtctttgatgat
tttgtggacatggagtttggcacaggtgcagtgaagatcacccctgcacatgaccagaat
gactatgaggttggacagagacatgggctggaggccgtcagcatcatggactcccgaggg
tcccttgtcaacgtgcccccacccttcctgggcctacccaggtttgaggccaggaaggtg
gtgctggcagcgctgaaggagcagggactgttccgtggcatggaggataaccccatggtg
gtgccactttgcaaccgctccaaggacgtggtggaacctctgctgcggccgcagtggtac
gtgcgttgtggggagatggcccaggctgccagcgctgcagtgactcgcggcgacctctgc
atcctgcctgaggcccatcagaggacatggcatgcctggatggacaacatccgggactgg
tgcatctcccggcagctgtggtggggccaccgtatcccagcctacttcatcactgtcagc
gacccggctgtgcccccaggggaggaccccgatgggcggtactgggtgagtgggcgcagt
gaggctgaggcccgggagaaggcagccaaggagttcagagtgtctcctgacaagatcagc
ctgcagcaagatgaggatgtattggatacctggttctcctctggcctcttccccttctcc
atcctgggctggcccaaccagtccgaagatctgagtgttttctacccggggacgctgttg
gaaacgggccatgacatccttttcttctgggtggccaggatggtcatgcttggcctgaaa
ctcaccggcaggctgcccttcagagaggtctacctccacgccattgtgcgagatgcccac
ggccggaagatgagcaagtctctgggcaatgttattgaccccctggatgttgtccacgga
gtctccctgcagggcctccatgagcagctactgaacagcaacctggatcccagtgaggtg
gagaaggctaaagaaggacagaaggcagacttcccagcggggattcccgagtgtgggacc
gatgctctccggtttggcctgtgtgcctacacatcccagggtcgtgacatcaacctggat
gtgaaccggatactgggttaccgccacttctgcaacaagctctggaatgccaccaagttt
gccctccgtggccttgggaaggggtttgtgccctcacccacctccgagcctgcaggccac
aagagcctggtggaccgatggatcctcagccggctgaccgaggctgtgaggctcagcaac
caaggtttccaggcctatgatttcccagctgtcaccaccgcccagtacagcttctggctc
tatgagctgtgtgatgtctacctggagtgcctgaagccagtgctgaatggagtggaccag
gtggcggctgagtgtgctcgccagaccctctacacctgcctggatgttggcctgaggttg
ctatcccccttcatgccctttgtgactgaggagctgttccagaggctgcctcggcggata
ccacaggctccccctagcctctgcattaccccctacccagagcccttagagtgctcctgg
aaggaccctgaggcagaagccaccatagagctggccctgagcatcacaagagttgtgcgg
tccctgcgtgccgattacaacctcacccggatccggcctgactgtttcctggaagtggct
gatgaggctacaggcgccatggcatcagcagtgtcaggctacgtgcaggcgctagccagc
gcgggtgtggtggctgtcctggccctgggagctcctgcaccacagggttgcgcagtggcc
cttgcctctgactgctgttccgtccacctgcagcttcaggggctggtggacccagcccgg
gagctgggtaagctgcaggccaagcgtggtgaggcgcagcggcaggcacagcgtttgcgg
gagcgccgtgctgtctcagactaccctgtcaaggtgcccatggaagtccaggaggcagac
aaagtcaaggtttgtggtctccaacagacagaagcagagctcaggaaggtggatgaggcc
atcacgctatttcagacgatgctgttatga
DBGET
integrated database retrieval system
