Manis javanica (Malayan pangolin): 108397922
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Entry
108397922 CDS
T06054
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04514
Cell adhesion molecule (CAM) interaction
mjv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108397922 (LRRC4B)
04517 IgSF CAM signaling
108397922 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mjv04515
]
108397922 (LRRC4B)
Cell adhesion molecules [BR:
mjv04515
]
Immunoglobulin superfamily
NGL family
108397922 (LRRC4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
DUF7617
Motif
Other DBs
NCBI-GeneID:
108397922
NCBI-ProteinID:
XP_017517059
LinkDB
All DBs
Position
17:5714917..5752681
Genome browser
AA seq
711 aa
AA seq
DB search
MACAHGSPCPPPLPGRMSWPHGALLFLWLFSPPLGAGGGGVALTSAAGGGSPPATSCPAA
CSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKN
LVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR
VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNR
LDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL
HRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFT
CYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGT
LNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGAGGGGGSPGGGGGGGGG
SGGYTYFTTVTVETLETQPGEEALQPRGTEKEPPGPTTDGAWGGGRPGDAAGPASSSTTA
PAPRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLR
KQHQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAAVAGGGGVGGDSHLALPALERDH
LNHHHYVAAAFKAHYSGNPSGGGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgcccacggctccccgtgccccccaccgctgcccggtaggatgtcctggccc
cacggggccctgctcttcctctggctcttctccccacccctgggggccggcgggggcggc
gtggccttgacgtctgctgccggagggggctccccgccagccacctcctgccccgcggcc
tgctcctgcagcaaccaggccagccgggtgatctgcacgcggagagagctggccgaggtc
ccagccagcatccctgtcaacacgcggtacctgaacctgcaggagaacggcatccaggtg
atccggacggacacattcaagcacctgcggcacctggagatcctgcagctgagcaagaac
ctggtgcgcaagatcgaggtgggcgccttcaatgggctgcccagcctcaacacgctggag
ctgtttgacaaccggctgaccaccgtgcccacgcaggccttcgagtacctgtccaagctg
cgcgagctctggctgcgcaacaaccccatcgagagcatcccctcctacgccttcaaccgc
gtgccctcgctgcggcgcctcgacctgggtgagctcaagcggctggagtacatctcggag
gcggccttcgagggcctggtcaacctgcgctacctcaacctgggcatgtgcaacctcaag
gacatccccaacctgacagccctggtgcgcctggaggagctggagttgtcaggcaaccgt
ctggacctgatccggcccggctccttccagggcctcaccagcctgcggaagctgtggctg
atgcacgcccaagtggccaccatcgagcgcaacgccttcgacgacctcaagtcgctggag
gagctcaacctgtcccacaacaacctgatgtcgctgccccacgacctcttcacacccctg
caccgcctggagcgtgtccacctcaaccataacccctggcactgcaactgcgacgtgctc
tggctgagctggtggctcaaagagacggtgcccagcaacacgacgtgctgcgcccgctgc
catgcgcccgccggcctcaagggtcgctacatcggcgagctggaccagtcacacttcacg
tgctatgcgcccgtcattgtggagccgcccacggacctcaacgtcaccgagggcatggcc
gctgagctcaagtgccgcacgggcacctccatgacctccgtcaactggctgacgcccaac
ggcaccctcatgacccacggctcctaccgcgtgcgcatctccgtcctgcacgacggcacg
ctcaacttcaccaatgtcaccgtgcaggacacgggccagtacacatgcatggtgacgaac
tcagccggcaacaccactgcctcggccacactcaacgtctctgccgtggaccccgtggcg
gctggcggcgccgggggaggcgggggcagcccagggggcggcgggggcggcggagggggc
agtggcggctacacctacttcaccacggtgacagtggaaaccctggagacgcagcccgga
gaggaggccctgcagccgcgggggacggaaaaggagccgccggggcccacgacggacggt
gcctggggcgggggccggcccggggatgcggcgggcccagcctcgtcgtccaccacggcg
cccgccccgcgctcctcgcggcccaccgagaaggcgttcacggtgcccatcacggacgtg
acggagaacgccctcaaggacctggacgacgtcatgaagaccaccaagatcatcatcggc
tgcttcgtggccatcacgttcatggccgccgtcatgctggtggccttctacaagctgcgc
aagcagcaccagctccataagcaccacgggcccacgcgcaccgtggagatcatcaacgtg
gaggacgagctgcccgccgcctccgccgtgtccgtggccgccgccgccgcggccgtggct
ggcgggggcggcgtcggcggggacagccacctggccctgcccgccctggagcgcgaccac
ctcaaccaccaccactacgtggcggccgccttcaaggcgcactacagcggcaaccccagc
ggcgggggcaagggcccgcccggcctcaactccatccacgaacctctgctcttcaagagc
ggctccaaggagaacgtgcaagagacgcagatctga
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