Manis javanica (Malayan pangolin): 108397927
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Entry
108397927 CDS
T06054
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03030
DNA replication
mjv03410
Base excision repair
mjv03420
Nucleotide excision repair
mjv03430
Mismatch repair
mjv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108397927 (POLD1)
03410 Base excision repair
108397927 (POLD1)
03420 Nucleotide excision repair
108397927 (POLD1)
03430 Mismatch repair
108397927 (POLD1)
03440 Homologous recombination
108397927 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjv03032
]
108397927 (POLD1)
03400 DNA repair and recombination proteins [BR:
mjv03400
]
108397927 (POLD1)
Enzymes [BR:
mjv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108397927 (POLD1)
DNA replication proteins [BR:
mjv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
108397927 (POLD1)
DNA repair and recombination proteins [BR:
mjv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
108397927 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
108397927 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
108397927
NCBI-ProteinID:
XP_017517067
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MDGKRRPGPGPGVPAKRARGGLWDEDEAPWPSQFEEELALMEEMEAEHRLQEQDEEELQP
ALEGAVDGQLSTTAIDARWLRPSPPRLDPQTQPLIFQQLEIDHYVGPAQPLPGAPAPSCS
STPVLRAFGVTDEGVSVCCHIHGFSPYFYTPAPPGFGPEHLSGLQQELNAAIGRDQRGGK
ELSGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRLAGLGTPS
FAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVLRLEGKATLCQLEVDVLWSDVVSHPP
EGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPC
APILGATVQSYEREEELLQAWSIFIRTMDPDVITGYNIQNFDLPYLISRAQTLKVHAFPF
LGRVSSLRSNIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFH
FLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTG
VPLGYLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIAT
LDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIRTPTGDEFVKMSVRKGLLPQIL
ENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSV
TGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAAD
WVSGHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLV
ANLVTASLRRLLIDRDPEGAVAHAKDIISDLLCNRIDISQLVITKELTRAAADYSGKQAH
VELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQ
QLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRHSCCIGCRTVLS
HQGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFY
MRKKVRKDLEDQEQLLRRFGPPGPEAW
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaagcggcggccaggcccagggcctggtgtgcccgcaaagcgggcccgtggg
ggcctctgggatgaggatgaggctccttggccatcccagttcgaggaggagctggcgctg
atggaggagatggaggcggagcacaggctgcaggaacaggatgaggaggagctgcagcca
gccctggagggggctgtggacggtcagttatccacaacagccatagacgcccgctggctt
cggccctccccgccccgcctggaccctcagacacagcccctcattttccagcagttggag
atcgaccattatgtgggtcccgcacagcccctgccgggagcgcccgcgccgtcctgcagc
tccacgcctgtgctccgtgcctttggggtcaccgacgagggcgtgtctgtgtgctgccac
atccatggcttttcgccctacttctacactccggcaccgcctggtttcgggcccgagcac
ctgagcggcctgcagcaggagctgaacgcggccatcggccgggaccagcgcgggggcaag
gagctgtcggggcccgccgtgctggctgtggagctgtgctcccgggagagcatgtttggg
taccacgggcacggcccctccccgtttctacgcatcacgctggcgctgccccgcctcgtg
gcccccgcccgccgcctcctggagcagggcatccgcctggcaggcctgggcacccctagc
ttcgcaccctatgaggccaacgttgattttgagatccggttcatggtggacgcagacatc
gtcggctgcaactggctggaactcccagctggaaaatatgtcctgcggctggaggggaag
gccacgctgtgtcagctggaggtggatgtgctgtggtcggatgtggtcagtcacccaccg
gaggggccatggcagcggatagcacccctgcgcgtgctcagcttcgacatcgagtgtgct
ggccgcaaaggcatcttccctgagcccgaacgggaccctgtgatccagatctgctcgctg
ggcctgcgctggggcgagccggagcccttcctgcgcctggccctcaccctgcggccctgt
gcccccatcctgggagccacggtgcagagctacgagcgggaggaagagctgctccaggcc
tggtcgatctttatccgcaccatggaccctgacgtgatcaccggctacaacatccagaac
tttgaccttccatacctcatctcccgggcccagaccctcaaggtacatgctttccccttc
ctgggccgtgtgtccagcctccgctccaacatccgggactcgtccttccagtcaaagcag
actggtcggcgggacagcaaggtggtcagcatggtgggccgcgtgcagatggacatgctg
caggtgctgctgcgggagtacaagctccggtcctacacgctcaatgccgtgagcttccac
ttcctgggcgagcagaaggaggacgtgcagcatagcattatcacggacctacagaacggg
aacgaccagacacgccgccgcctggccgtgtactgcctcaaggacgccttcctgccactg
cggctgctggagcggctcatggtgctggtgaacgccatggagatggcgcgcgtcaccggc
gtgccccttggctacctcctcagccgcggccagcaggtcaaggtcgtgtctcagctgcta
cggcaggctatgcgcgaggggctgctgatgcctgtggtgaagacggagggcggcgaggac
tacacgggggccacagtcatcgagcccctcaaagggtactatgatgtccccatcgccacc
ctggacttctcctcactgtacccgtccatcatgatggcccacaacctgtgctacaccaca
ctcctgcgacccggggctgcccagaagctgggcctgaccgaggaccagttcatcaggaca
cccacaggggacgagtttgtgaagatgtcggtgcggaagggactactgccccagatcctg
gagaacctgctcagcgcccggaagagggccaaggctgagctggccaaggagacagacccc
ctgcggcggcaggtcttggatgggcggcagctggcgctgaaagtgagtgccaactccgtg
tatggcttcactggtgcccaggtgggcaagctgccgtgcctggagatctcacagagcgtc
actgggttcgggcgccagatgattgagaaaacaaagcaactggtggagtccaagtacaca
gtggagaatggctacagtaccagtgccaaggtggtgtacggtgacactgactcagtcatg
tgccgatttggtgtctcttctgtggccgaggcgatggccctgggacgggaggctgcagac
tgggtgtcaggtcacttccccccacccatccggctcgagtttgagaaggtctacttcccc
tacctgctcatcagcaagaagcgctacgccggcctgctcttttcctcccggccagatgcc
catgaccgcatggactgcaagggcctggaggctgtgcgcagggacaactgccccctagtg
gccaacctcgtcaccgcctcgctgcgccggctgctcatcgaccgcgatcctgagggcgcc
gtggcccacgcaaaggacatcatctcggacctgctgtgcaaccgcatcgacatctcccag
ctggtcatcaccaaggagctgacgcgcgcggccgccgactactccggcaagcaggcccac
gtggagctggccgagaggatgaggaagcgggaccccgggagtgcgcccagcctgggcgac
cgtgtcccctacgtgatcattggtgccgccaagggcgtggctgcctacatgaagtccgag
gaccccctcttcgtgctggagcacagcctgcccattgacacacagtactacctggagcag
cagctcgccaagccgctcctgcgcatcttcgagcccatcctgggcgagggtcgtgcggag
gctgtgctgctgcggggggaccacacccgctgcaagacggtgctcacgggcaaggtgggc
ggccttctggcctttgccaagcgccacagctgctgcattggctgccgcactgtcctcagc
caccagggagccgtgtgcaagttctgccagccccgggagtctgagctgtaccagaaggag
gtgtcccacctgaacgccctggaggagcgcttctcacgtctctggactcagtgccagcgc
tgtcagggcagcctgcacgaggacgtcatctgcaccagccgggactgccccatcttctac
atgcggaagaaggtgcggaaagacctagaggaccaggagcagcttctgagacgcttcgga
ccccctggccctgaggcctggtga
DBGET
integrated database retrieval system
