Manis javanica (Malayan pangolin): 108398028
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Entry
108398028 CDS
T06054
Symbol
DDX50
Name
(RefSeq) ATP-dependent RNA helicase DDX50 isoform X1
KO
K13183
ATP-dependent RNA helicase DDX50 [EC:
5.6.2.7
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108398028 (DDX50)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108398028 (DDX50)
Spliceosome [BR:
mjv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108398028 (DDX50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
108398028
NCBI-ProteinID:
XP_017517266
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MMPGKLLWGDIMELEAPLEETESQKEERQKSDRMKSRYHYDSDEKSGIRENGVTDDLEAP
KPKKTKMKEKLNGDTEEECTRLSDEFSKSRKSRRKDLSNGDIDKYKEKSKRLSSLGSSTH
KSSDNKPEETVTCEQKEGDFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIA
QARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDLTRKLS
VACFYGGTSYQSQISHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLG
FAEQVEDIIHKSYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAA
TTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQTARTCS
LPCLGAPTHLQISVQSLTFQGILPCHKNAQCLHGDIAQSQREITLKGFREGSFKVLVATN
VAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFYQPRERGQLRYVEQK
AGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYDAVDFFRPSAQRLIDEKGAVDALAAAL
AHISGASSFEPRSLITSDKGFVTMTLESPEEIQNVSCAWKELNRKLSSNAVTQVTRMCLL
KGNTGVCFDVPTTESERLQAEWHDSDWILSVPPKLPEIEEYYDGNTFSNSRQRSGWSSGW
SGRSGRSGGRFGGRSGRQNRQGSQSGSRQDSRRRSGNRNRSRSGGHKRSFD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgggaaactcctctggggggacattatggagctggaggcacccttggaggag
accgagagccagaaggaggagaggcaaaagagtgatagaatgaagtcaaggtaccattat
gactcagatgagaaatcaggaataagagaaaatggtgttacagatgacctggaagctccc
aagcccaaaaaaactaaaatgaaagagaagctaaatggagacactgaagaagagtgtact
agactttcagatgaattttctaaatctcgtaagtcaagaagaaaagacctgtcaaatgga
gatattgataaatataaagaaaaatcaaagcgactgtcatccttaggtagttctactcat
aaatcaagtgataataaaccagaggagactgtaacttgtgaacagaaagaaggagacttc
tccaatttccctatttctgaagagactataaagcttctgaaaggtcgaggggtaacgtat
ctctttcctattcaagttaagacttttggtcctgtgtatgaaggaaaagatttaattgct
caagcacggacaggaacaggaaagacattctcttttgccatccccttgattgaaagactc
caaagaaatcaagagactattaaaaaaagccgctcaccaaaggtacttgttttggctcct
acaagggaactggcaaaccaagtagccaaagacttcaaagatttaactaggaaactcagc
gtggcatgtttttatggtggaacatcttatcaaagccaaatcagtcatattcgaaatggc
attgacatcttggttgggacacctggtcgtatcaaagaccatctgcagagcggccgatta
gatctttctaaactgcgccacgttgtgcttgatgaagtggatcaaatgttagatttaggt
tttgctgaacaagttgaagatattatccataaatcctacaaaactgattctgaagacaat
cctcagactttacttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaa
tacatgaaatccagatatgaacaggttgaccttgttggaaaaatgactcaaaaggctgca
actactgtggaacatttggccatccagtgccattggtctcagaggccagcagtcattgga
gatgtccttcaagtctacagtgggtctgaagggagggctattattttctgtgagaccaaa
aagaatgtaactgaaatggccatgaatccacacataaaacagacagctcgaacttgtagt
ctaccttgcctcggagctcctactcaccttcagatatcagttcagagcctcacttttcag
ggaattcttccttgccacaaaaatgcccagtgtttacatggggacattgcacagtcacaa
agggaaattacactgaaaggcttcagagaaggtagctttaaagttttggtggccaccaat
gtggctgcccgtggtttggacattcctgaggttgacctggtgattcaaagttctcctcca
caggatgttgagtcctacattcatcgctctgggcgcacaggtagagctggtcggacaggg
atttgcatatgtttttatcagccaagagaaagaggccaactaagatatgtggaacaaaaa
gcaggaattacttttaaacgtgtaggtgttccttctacaatggatttagttaaatctaaa
agcatggatgccatcaggtctctggcttccgtttcttatgatgctgttgattttttccgg
ccatcagctcagagactgatagacgagaagggggcagtggatgccttggctgcagcatta
gcccacatctctggtgcatcaagttttgaaccacgatctttgattacctctgataagggg
tttgtgaccatgactctggagagcccagaagaaatacagaatgtcagctgtgcttggaaa
gaacttaacaggaagctgagtagtaatgctgtgacccaggttaccagaatgtgcctccta
aaaggaaatacgggtgtttgctttgatgttcccacaaccgagtctgaaaggttacaggca
gagtggcatgattcagactggatactctcagtgccccccaagttacctgaaattgaagaa
tattatgatggaaacacattttctaattccagacagaggagtggctggtcaagtggctgg
tcgggcaggtcgggccggtcaggtggtcgatttggtggccggtcaggtagacagaatcga
cagggcagtcagtcaggaagtcgacaagacagtagaagacgaagtgggaatagaaatcga
tcaagaagtgggggacacaaacggagttttgactga
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