Manis javanica (Malayan pangolin): 108398191
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Entry
108398191 CDS
T06054
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03015
mRNA surveillance pathway
mjv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108398191 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
108398191 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108398191 (PABPC4L)
03041 Spliceosome [BR:
mjv03041
]
108398191 (PABPC4L)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108398191 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
108398191 (PABPC4L)
Spliceosome [BR:
mjv03041
]
Complex C
Other components
Complex C specific factors
108398191 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RBD_DEAH11
RRM_occluded
RRM_Nup35
RRM_10
RRM_MARF1
RRM_3
RBD_RDR6
NTP_transf_7
Motif
Other DBs
NCBI-GeneID:
108398191
NCBI-ProteinID:
XP_017517500
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All DBs
Position
5:58835425..58839377
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AA seq
371 aa
AA seq
DB search
MNVAAKYRQASLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLITRRSLGYAYVNFLQ
LADAQKALDMMNFDDVKGKSIRLMWSQRDDYLRKSGIGNVFIKNLDKSIDNKTLHEHFSA
FGKILSSKVMSDDDQGSRGYAFVHFQNQVAADRAIEEMNGTLLKDCRLFVGRFKNRRDRE
AELRNRANEFTNVYVKNFGDDMDDESLKEVFSQYGKTLSVKVMTDNSGKSKGFGFVSFDS
HEAAKKAVEKMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKQERFRKCRGVELYIKN
LDDTIDDAKLRKAFSSFGSISRVKVMQEEGRSKGFGLICFSFPEEAAKAMAEMNGRILGS
KPLNIALARRS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagcagccaagtaccgccaggcctctctctatgtcggtgatctccatgcagac
gtcaccgaggacctgttgttcaagaaattcagcgctgtggggcctgtgctgtccattcgc
atctgcagggacctgatcactcgccgctccctgggctatgcctacgtgaacttcctgcag
ctggctgatgcccagaaggctctggatatgatgaactttgacgatgtaaaaggcaaatcc
atccgtctcatgtggtcccaacgtgatgactacctaaggaaatctggaattgggaacgtg
ttcatcaaaaacctggataaatccattgataataaaacccttcatgaacatttttcagct
tttgggaagatcttgtcctccaaagtgatgagtgatgatgatcaaggctccaggggttat
gcattcgtgcattttcagaaccaggttgctgcagacagagccatcgaggagatgaatggg
acgctgctgaaggactgcagactgtttgttggcagattcaaaaaccgccgagatcgggaa
gctgaactccgaaacagagccaatgaattcactaatgtttacgttaaaaactttggggat
gacatggatgatgagagtctaaaggaagtcttcagtcaatatggcaaaaccctgagtgtt
aaggtgatgacagataacagtgggaaatccaaaggctttggctttgtgagttttgacagc
catgaggctgccaaaaaggctgttgaaaaaatgaatggaaaggacataaacggacagctg
ctttttgtaggccgggcacaaaagaaagcagagagacaggctgagttaaagcaaatgttt
gagcagctgaagcaggaaagatttcggaagtgccgtggggtggagctctatattaagaac
ctcgatgacaccattgacgatgcaaaattacggaaggcattttcgtcatttggatcaatt
agcagagttaaggtaatgcaggaagaagggcggagcaaagggtttggcttgatatgcttc
tcctttcctgaggaggccgctaaagcaatggctgagatgaatggccgcatcttgggctcc
aagccactcaacattgctctggcccggaggtcctag
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