Manis javanica (Malayan pangolin): 108398405
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Entry
108398405 CDS
T06054
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04151
PI3K-Akt signaling pathway
mjv04510
Focal adhesion
mjv04512
ECM-receptor interaction
mjv04611
Platelet activation
mjv04820
Cytoskeleton in muscle cells
mjv04926
Relaxin signaling pathway
mjv04933
AGE-RAGE signaling pathway in diabetic complications
mjv04974
Protein digestion and absorption
mjv05146
Amoebiasis
mjv05165
Human papillomavirus infection
mjv05205
Proteoglycans in cancer
mjv05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108398405 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108398405 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108398405 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108398405 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
108398405 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
108398405 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
108398405 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
108398405 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
108398405 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
108398405 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
108398405 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108398405 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mjv00536
]
108398405 (COL1A2)
Glycosaminoglycan binding proteins [BR:
mjv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108398405 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
108398405
NCBI-ProteinID:
XP_017517878
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLQEATARKGPTGDRGPRGERGPPGPPGRDGEDGIPG
PPGPPGPPGPPGLGGNFAAQYDGKGIGAGPGPMGLMGPRGPPGASGAPGPQGFQGPAGEP
GEPGQTGPAGARGPSGPPGKAGEDGHPGKPGRSGERGVVGPQGARGFPGTPGLPGFKGIR
GHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSV
GPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNTGPSGPAGPRGEVGLPGLSGPVGPPGNP
GANGLTGAKGAAGLPGVAGAPGLPGPRGISGPVGAAGATGARGLVGEPGPAGSKGESGNK
GEPGASGAQGPPGPSGEEGKRGPSGEAGSSGPSGPPGLRGSPGSRGLPGGDGRAGVMGPA
GPRGASGPAGVRGPSGDSGRPGEPGLMGPRGFPGSPGNVGPAGKEGPVGLPGIDGRPGPV
GPAGARGEPGNIGFPGPKGPTGDPGKSGEKGHAGLAGARGAPGPDGNNGAQGPPGLQGVQ
GGKGEQGPAGPPGFQGLPGPAGTVGEVGKPGERGIPGEFGLPGPAGPRGERGPPGESGAA
GPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGASGPGGLPGERGAAGIPGGKGEKGET
GLRGEIGNTGRDGARGAPGAVGAPGPAGATGDRGEAGPAGPAGPAGPRGSPGERGEVGPA
GPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGSAGPSGPNGPPGPAGSRGDG
GPPGAVGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGASGPP
GFTGEKGPSGEPGTAGPPGTSGPQGILGAPGILGLPGSRGERGLPGVAGSLGEPGPLGIS
GPPGARGPSGGVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQAGHKGERGYPGNLGPVGAV
GAPGPHGPVGPTGKHGNRGEPGPVGSVGPVGAIGPRGPSGPHGIRGDKGEPGDKGPRGLP
GLKGHNGLQGLPGLAGQHGDQGSPGSVGPAGPRGPAGPSGPIGKDGRSGHPGTVGPAGIR
GSQGSQGPAGPPGPPGPPGPPGASGGGYDFGYDGDFYRADQPRSPPSLRPKDYEVDATLK
SLNNQIETLLTPEGSKKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDTIKVYCDFSTG
ETCIRAQPEKIPGKNWYRSSKAMKHVWVGETINGGTQFEYNVEGVSTKEMATQLAFMRLL
ANHASQNITYHCKNSIAYMDEETGNLKKSVILQGSNDVELVAEGNSRFTYTVLVDGCSRK
TNEWRKTVIEYKTNKPSRLPILDIALLDIGGADQDFIVDVGPVCFK
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca
acatgccaatccttacaagaggcaactgcaagaaagggcccaactggagatagaggacca
cgaggagaaaggggtccaccaggcccaccgggcagagatggtgaagatggtatcccaggc
cctcctggtcctcctggtcctcctggcccccctggtctcggcgggaactttgctgctcaa
tatgatggaaaaggaattggtgctggtcctggaccaatgggcttgatggggccgagaggc
cctcctggtgcatctggagctcctggtcctcaaggtttccaagggcctgctggtgagcct
ggtgaacccggtcaaactggtcctgcaggtgctcgtggtccatctggacctcctggcaag
gctggtgaggatggtcaccctggaaaacctggacgatctggcgagagaggagttgttgga
ccacagggtgctcgtggattccctggaactcctggacttcctggcttcaagggcattagg
ggacacaatggtctggatggattaaagggacagcctggtgctccaggtgtgaagggtgaa
cctggtgcccctggtgaaaatggaactccaggtcaaacaggagcccgtgggcttcctggt
gaaagagggcgagtcggtgcccccggcccagctggtgcccgtggaagtgatggaagtgtg
ggtcctgtgggtcctgctggtcccattgggtccgctggccctccagggttcccaggtgcc
cctggccccaagggtgaacttggacctgttggtaacactggaccttctggtcccgcgggt
ccacgtggtgaagtgggtcttccaggtctctctggccccgtcggacctcctggcaacccc
ggagccaatggcctgactggtgctaagggtgccgctggcctgcccggtgttgctggggct
cctggcctccccgggccccgtggcatctccggtcctgtcggtgctgctggagctactggt
gccagaggacttgttggtgagcctggtccagctggttccaaaggagaaagtggtaacaag
ggtgagcctggtgcttccggggcccagggtcctcctggccccagtggtgaagaaggaaag
agaggccccagtggtgaagctggctcttctggcccctccggacctcctgggctgcgagga
agtcctggttctcgtggtcttcctggaggtgatggcagagctggtgtcatgggtcctgct
ggccctcgtggggcaagcggtcctgctggtgtgcgaggtcccagtggagattctggtcgt
cctggggagcctggtctcatgggaccccggggttttcctggttcccctggaaatgttggc
ccagctggtaaagaaggtcccgtgggcctccctggcatcgacggcaggcctgggccagtc
ggccctgctggagcaagaggagagcctggcaacattggatttcctggccccaaaggcccc
actggtgatcctggcaaaagtggtgagaaaggtcatgctggccttgctggtgctcggggt
gctccaggtcctgatggaaacaatggtgctcagggacctcctggactacagggtgtccaa
ggcggaaaaggtgaacagggtccagctggtcctccaggcttccagggtctgcctggccct
gcaggtacagttggtgaagttggcaaaccaggcgaaaggggtatccctggtgaatttggt
ctccctggtcctgctggtccaagaggggagcgtggccccccaggtgaaagcggtgctgct
ggtccttctggtcctattgggagccgaggtccttctggaccccccgggcctgatggaaac
aagggcgagcctggtgtgcttggtgctccaggcaccgcgggtgcatctggtcctggtgga
ctcccaggggagaggggtgctgccggcatacctggaggcaagggagaaaagggtgaaact
ggtctcagaggtgaaattggaaacacaggcagagatggtgctcgtggggctccgggtgct
gtaggtgctcctggtcctgctggagccactggtgaccggggtgaagctggtcctgctggt
cctgctggtcctgctggtccccgtggtagccctggcgagcgtggtgaggttggtcctgct
ggccccaacggatttgctggtcctgctggcgctgctgggcaacctggtgctaaaggagag
agaggaaccaaagggcctaagggtgaaaacggtcccgttggtcccacaggtcctgttgga
tctgctggcccatccggtcccaatggcccccctggccctgccggaagtcgtggtgatggt
ggtccccctggtgctgttggtttccctggtgctgctggacgtactggtcctcctggaccc
tctggtatcactggccctcctggtccccctggtgctgctggtaaagaaggacttcgtggg
cctcgtggtgaccaaggtccagttggccgaactggcgaaacaggtgcatccggcccccct
ggctttactggtgagaagggtccctctggagagcctggtactgctggacctcctggcacc
tcaggacctcaaggtattcttggcgctcctggtattcttggtctcccaggctctagaggt
gaacgtggtctaccaggtgttgctggatccttgggtgaacctggtcctctcggcatttca
ggcccacctggggctcgtggtccctctggtggtgtgggtaatcctggagtcaatggtgct
cctggtgaagctggtcgtgatggcaaccctggaaacgatggtcccccaggccgtgatggt
caggctggacacaagggggagcgtggttaccctggcaaccttggtcctgttggtgctgtg
ggtgcacctggtcctcatggccccgtgggtcccaccggcaaacatggaaaccgtggtgaa
cctggtcctgtgggctccgttggtcctgttggtgccattggtccaagaggtcctagtggc
ccccacggtattagaggtgataagggagagcctggtgataaggggcccagaggtcttcct
ggcttaaagggacataatggattgcaaggtcttcctggtcttgctggtcaacatggcgat
caaggttctcctggctctgtgggtcctgccggccctaggggccctgctggtccttctggc
cctattggcaaagatggtcgctctggacatcctggaacagttggacctgctggcattcgt
ggctctcagggtagccaaggtcctgctggccctcctggtcctcctggcccccctggacct
ccaggcgcaagtggtggtggttatgacttcggttatgatggagacttctatagggctgac
cagcctcgttcaccaccttctctcagacccaaggattatgaagttgatgctactctgaaa
tctctcaacaaccagattgagactcttcttactcctgaaggctctaagaagaacccagct
cgcacatgccgtgacttgagactcagccacccagagtggagcagtggttactactggatt
gaccctaaccaaggatgcactatggacactatcaaagtatactgtgatttctctactggc
gaaacatgcatccgagctcaacctgaaaagatcccaggcaagaactggtacagaagttcc
aaggccatgaagcacgtctgggtgggagaaactatcaatggtgggacccagtttgaatat
aatgttgaaggagtaagcaccaaggaaatggctactcaacttgctttcatgcgcctgctg
gccaaccatgcctctcaaaacatcacctaccactgcaagaacagcattgcatacatggat
gaggagactggtaacctgaaaaagtctgtcattctacaaggctccaatgatgttgaactt
gttgctgagggcaacagcaggttcacttacactgttcttgtagatggctgctcgagaaag
acaaatgaatggagaaagacagtcattgaatacaaaacaaacaagccatctcgcctgcct
atccttgatattgcacttttggacatcggtggtgctgaccaagatttcattgtggacgtt
ggcccagtctgtttcaaataa
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integrated database retrieval system
