KEGG   Manis javanica (Malayan pangolin): 108399185
Entry
108399185         CDS       T06054                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X2
  KO
K10570  DNA excision repair protein ERCC-8
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03420  Nucleotide excision repair
mjv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108399185 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108399185 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mjv04121]
    108399185 (ERCC8)
   03400 DNA repair and recombination proteins [BR:mjv03400]
    108399185 (ERCC8)
Ubiquitin system [BR:mjv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108399185 (ERCC8)
DNA repair and recombination proteins [BR:mjv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108399185 (ERCC8)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_Aladin Beta-prop_NOL10_N PAC11 WD40_MABP1-WDR62_1st CFAP251_N WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_RIG_1st NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 108399185
NCBI-ProteinID: XP_017519287
LinkDB
Position
1:104566106..104611962
AA seq 395 aa
MLGFLSARQGGLDEPLRLRRAVSTRRILGLELNKDRDVERIHGSGINTLDIEPVEGRYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSIDRNHPDVHQYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQTADIFNFEETVYCHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQYNGKKSQAAESA
NTAHNGKVNGLCFTNDGLHLLTVGTDNRMRLWNSSSGENTLVNYGKVCNDSRKGLKFTVS
CGCSLEFVFVPYGSTIAIYTIYSGERISMLKGHYKTVDCCVFQSHFQELYSCSRDCNILS
WVPSLYEPVPDDETTTKSQLNPAFEDAWSSSDEEG
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgctggggtttctgtcggcgcggcaagggggcctggacgaacctcttcgcctccggaga
gcagtgtccacacggaggattttgggactggagttaaacaaagacagagatgttgaaagg
atccacggcagtggcattaacacacttgacattgaacctgttgaagggagatacatgtta
tcaggtggttcagatggtgtgattgtactttatgatcttgagaactccagcagacaacct
tattacacatgtaaagcagtttgttccattgacagaaaccatcctgatgttcaccaatat
agtgtggaaactgtacagtggtatcctcatgacactggcatgttcacatcaagctcattt
gataaaactctgaaagtatgggatacaaatacattacagactgcagatatatttaatttt
gaagaaactgtttattgtcatcatatgtctccagttgccaccaagcactgtttggtagca
gtcggtactagagggcccaaagtacaactttgtgacttaaagtctggatcctgttcccac
attctacagggtcacagacaagaaatactggcagtttcctggtcaccacgttatgattat
atcttggcaactgcaagtgctgacagtagagtaaaattatgggatgtgagaagagcatca
ggatgcttgattactcttgatcaatataatggaaaaaagtcacaagctgctgaatcagca
aacactgctcataatgggaaagttaatggcttatgttttacaaatgatgggcttcacctc
ctcactgttggtacagataatcgaatgaggctgtggaatagctccagtggagaaaacaca
ctagtcaactatggaaaagtttgtaatgacagcagaaaaggattgaagttcactgtctcc
tgtggctgcagtttggaatttgtttttgtaccatatggtagcaccattgctatttataca
atttactcaggagaacggatatctatgcttaagggacattataaaactgttgactgctgt
gtatttcaatcccatttccaggaactttatagctgtagcagagactgcaatattctttct
tgggtaccatccttatatgaaccagttcctgatgatgagactacaaccaaatcacaatta
aatccagcatttgaagacgcctggagcagcagtgatgaggaaggatga

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