Manis javanica (Malayan pangolin): 108399250
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Entry
108399250 CDS
T06054
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv05012
Parkinson disease
mjv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
108399250
05022 Pathways of neurodegeneration - multiple diseases
108399250
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GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
108399250
NCBI-ProteinID:
XP_017519395
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDPQSEDRAASSSSWNCSVSTLLTNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNESDDQKNQKAEFQKGGDPDPGPQPGELS
TGDGEGGPQSKSSEPSALLGELEHYDLDMDEILDVPYIKTSQQLASFKVTSEKRILGLCT
SINGLSGKACSAGSAETSPASRTPFCVLSPVKSPRLRKASSGARDQPKLSTEEAEGSPLG
KCGSACEPGNQTKDFLSKTFSEPHGRKVEKAVPDCQLRAFRLQSSTAEPKLEEQIGGTSW
TSPSGPEERSEYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDESGNNLLHIAASQGHA
ECLQHLTSLMGEDCLSERNTEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSRDFPSL
IHYAGCYGQEKILLWLLQFMQEQAISLDEVDQDGNSAVHVASRHGNLGCIQTLVEYGANV
TMQNHAGEKPSQSAEHHGHSLCSRYLVVVETCMSLASQVVKLTKQLKEQTMERVTLQNQL
QQLLEAQKSEGKSFLSSPSSPSSPASRKSQWKSPDADEESITKSKPVVQEGIQVLGSLSA
TSRARAKAKDEDSNKILRQLLGKDISENVCTQEKLSLEFQDAQASSRNSKKMPVEKRELK
LARLRQLMQRSLSESDTDRTTSEDPKSTPARKADRPRPQPIVEGAESMDSAESLHVMIKK
HTLASGRRFPFTVKASKPLDGHSPSPTSESSDPDLESQSPGSGTTPPNQPSGDPAQPSPD
STAAQKLAMSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQVEQNSLELNGEKDRDKGRAL
QRTSTSSDAGDQLKRPFGTFRSIMETLSGNQNNNNNYQAPNQLKTSTLPLTSLGRKVTDP
KGNPASSGSKGKNKAEMYSSCINLSSNPLIEEHLRNYARHNDINRKMKKSYSIKHIAEPE
SKELFL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccccgaataccttgacttggatgaaattgacttcagtgatgacatatcttac
tcagtcacgtctctcaagaccatcccagaactatgccgaagatgtgatccgcaaagcgaa
gacagagcagcttctagctctagctggaactgcagcgtctcaactcttcttacgaacaca
caaaagcccactggaatcgctgatgtgtacagtaagttccgccccgtgaagcgagtttct
ccactgaaacatcagccagaaactctagaaaacaatgaaagtgatgatcaaaaaaaccag
aaagcagagttccagaaggggggtgatcctgacccaggcccccagcctggggagctcagc
acaggagacggagagggcggcccccaaagtaagagcagtgagcccagtgccttgctgggc
gaactggagcattatgacctcgacatggatgaaattctggatgtgccttacattaaaacc
agtcagcagcttgcctcttttaaggtaacgtcagaaaaaagaattttgggattatgcaca
agcatcaacggcctttctggcaaagcctgctctgcaggaagcgctgagacctcgccagcc
agcaggacgccgttctgtgtcctttctcccgtgaagagccctcgcttaagaaaagcatca
tccggggcacgcgaccagccaaagctctccactgaagaagccgagggctcacccctggga
aaatgtggctctgcgtgtgagcctggaaaccagactaaggacttcctaagcaagaccttt
agtgagcctcacggtcgaaaagttgagaaggcagtgccagactgccagctcagggccttc
cgtctgcagtcctcaaccgcggagcccaagctagaggagcagattgggggcacgagctgg
accagcccctcaggcccagaggaaaggagtgagtatctgaaaaaagttaaaagcatcttg
aacatcgttaaggaaggccagatctctctcctgccacacctagctgccgacaatctagac
aaaattcacgacgaaagtggaaacaatctcttgcacatagcggcatcgcagggacatgca
gaatgcctccagcacctcacttccttgatgggagaggattgcctcagtgagcgaaacacc
gagaagctgacaccggcaggcctggccatcaagaatggtcagttggagtgtgtacgctgg
atggtgagtgaaacagaagccattgcagaactgagttgttccagggattttccaagcctt
attcattatgcaggttgctatggccaggaaaagattctcctatggcttcttcagtttatg
caagaacaggccatctcactggatgaagtggaccaggatggcaacagcgccgttcacgta
gcctcccggcacggcaaccttgggtgcatccagaccttggtcgaatatggagcaaatgtc
accatgcagaaccacgcaggggaaaagccctcccagagcgcagagcatcacggccactcg
ctgtgctcccggtacctggtggtggtggagacctgcatgtcgctggcctcccaggtggtg
aagctcaccaaacagctaaaggaacagacgatggaacgtgtcacactgcagaaccagctc
cagcaacttctagaggcccagaaatcagagggcaagtcattcctttcttcacccagctca
ccatcctcccctgcttccagaaagtcccagtggaaatccccagatgccgatgaagagtct
ataaccaaaagcaaaccagtagtccaagaggggattcaggttctcggaagcctgtcagca
accagccgagccagggccaaagcaaaagacgaagattctaataaaatcctacgccagtta
ctgggaaaagatatctcagagaatgtgtgcacccaggaaaagctgtccttggaatttcag
gatgctcaggcttcctctagaaattccaaaaagatgcctgtggagaagcgggagctgaag
ttagccaggctgaggcagctgatgcagcggtccctgagtgagtccgacacggaccgcacc
acctccgaggaccccaagagcacgccagcaagaaaggctgacaggcccaggcctcagccc
atcgtggaaggtgcggagagcatggacagcgcagaaagcctgcacgtgatgatcaagaaa
cacaccttggcatcaggacgcaggtttccttttactgtcaaggcctccaaacctctagat
ggccatagcccatctcccacttcagagagcagcgacccagacttggaatcacagagtcca
ggctcagggacgactcccccaaaccagccctctggagaccccgctcagcccagccccgac
agcacagctgcccagaaactggccatgagtcccaaaagcgctctcaagtctccgtcttct
aagcgccggacgtctcagaactcgaagctcagagtcaccttcgaggagcctgtggtgcag
gtagagcaaaatagccttgaactaaatggagaaaaagacagagataagggcagggccctg
cagcggacctccacgagtagtgacgcaggggatcaactgaaaaggcctttcggaaccttc
cggtctatcatggagacgctaagcggaaaccagaacaataataataactatcaggcaccc
aaccagctgaagacctctacactacccttgacctcactgggaaggaaggtgacagatccc
aagggaaatcctgcaagctctggcagtaaaggaaagaataaggcggagatgtacagcagc
tgcatcaatctttcctctaatccgctgattgaagaacatctgcgtaactatgcacggcat
aatgacatcaacagaaaaatgaagaaatcctacagcataaagcacattgctgagccagag
tcaaaagaactcttcttgtaa
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