Manis javanica (Malayan pangolin): 108399380
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Entry
108399380 CDS
T06054
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mjv03016
]
108399380
Enzymes [BR:
mjv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
108399380
Transfer RNA biogenesis [BR:
mjv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108399380
Prokaryotic type
108399380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Sol_i_2
Motif
Other DBs
NCBI-GeneID:
108399380
NCBI-ProteinID:
XP_036870108
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MGLPSLRAAAGALRKACGAWIPRPGPYRFCLPPMAGNGKAPVPMSTRQEQDRKSPSGWQG
RARAWEEPEQQAKKLKSSADGEPHRKLPKRKIVLLLAYSGKGYHGMQRNVGSSQFKTIED
DLVCALVRSGCIPENHGEDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDGILEKINSHL
PSHIRILGVKRVTGGFNSKNKCDARTYFYMLPTFAFAHKDHDLQDETYRLSAETLQHVNR
LLACYKGTHNFHNFTSQKGPQEPSARRYILDMFCEEPFVREGMEFAVIKVKGQSFMTHQI
RKMVGLVVAIVKGYAPESVLERSWGEAKVDVPKAPGLGLVLERVHFEKYNQRFGCDGLHE
PLDWAREEAEVTAFKEQHIYPTIISTEHHERSMALWLSTLPMHDFSATAHAAAGPDAKVG
LGAGTGPSKELAKCVPASALSVAELLTHSALALWCPLQR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggggctccccagcctgcgggcggctgctggggccctgaggaaagcctgcggagcgtgg
atcccgcgcccgggaccgtatcgcttctgtttgccccccatggccgggaacggaaaggct
cctgtgccaatgagcaccaggcaggagcaggataggaagtcccctagcggctggcagggc
cgggctcgggcctgggaggaaccagagcaacaggcgaagaagctcaagagcagcgcagat
ggggagccgcacaggaagctgcccaagcggaagattgtgttgcttctggcctattccggg
aagggctaccatggcatgcagaggaatgttgggtcctcacagttcaagaccatcgaagat
gacctggtgtgtgccctggtgcggtcaggctgtattccagagaatcatggcgaagacatg
aggaagatgtccttccagaggtgcgcccggacagacaagggcgtgtctgcggctggccag
gtggtgtccctgaaggtgtggctgattgatggcattttagaaaagatcaacagccacctc
ccatctcacattcggatactgggagtgaagcgagtcacaggcggcttcaactctaagaac
aaatgtgacgccaggacctacttctatatgctgcccacatttgcctttgcccacaaggac
catgatttgcaggatgagacataccggctgagtgcagaaactctgcagcacgtgaaccgg
ctccttgcctgctataagggcacgcacaacttccacaacttcacctcgcagaaggggcct
caggagcccagtgcccggcgctacatcctggacatgttttgtgaggagcccttcgtgcgt
gagggcatggagtttgcagtgatcaaggtgaaggggcagagtttcatgacgcaccagatc
aggaagatggttggcctggtggtagccatcgtcaagggctacgcacctgagagcgtgctg
gagcgcagctggggggaggcaaaagtggatgtacccaaggcaccagggctgggccttgtc
ctggagcgcgtgcacttcgagaagtacaaccagcgctttggctgtgacgggttgcatgag
cctctggactgggcacgcgaggaggcagaggtcactgccttcaaggagcagcacatctac
cccacgatcatcagtaccgagcaccatgagcggtccatggccctgtggctgagcaccctg
cccatgcacgacttcagtgccactgctcatgcggcagctggccccgatgccaaggtgggg
ctaggggctggcacgggcccttccaaggagcttgccaagtgtgtgcctgcatctgccctg
tctgtggctgagctgctaacccactctgcactggcgttgtggtgcccattgcagagatga
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