Manis javanica (Malayan pangolin): 108399686
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Entry
108399686 CDS
T06054
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108399686 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108399686 (XAB2)
03041 Spliceosome [BR:
mjv03041
]
108399686 (XAB2)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108399686 (XAB2)
Spliceosome [BR:
mjv03041
]
Complex B
Other components
Prp19-related factors
108399686 (XAB2)
Complex C
108399686 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_8
TPR_2
Suf
TPR_19
ARM_TT21
TPR_15
ARM_TT21_C
TPR_1
TPR_NPHP3
TPR_7
AbiH
Motif
Other DBs
NCBI-GeneID:
108399686
NCBI-ProteinID:
XP_017520071
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MARLLRPERSDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKL
LPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQ
GRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEY
IEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAI
IRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFE
ESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKR
VALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATK
VSFKQVDDLAGVWCECGELELRHENYEQALQLLRKATALPARRAEYFDASEPVQNRVYKS
LKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYER
GISLFKWPNVSDIWSSYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLE
EEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEH
AREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTSAFWQTWKDFEVRHGNEDTIREM
LRIRRSVQATYNTQVNFMASQMLKVSGSTTGTVSDLAPGQSGMDDMKLLEQRAEQLAAEA
ERDQPPRAQSKILFVRSDASREELAELAQQANPDEIELGEDEDEDEMDLEPNEVRLEQQS
VPAAVFGSLKED
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgactcttgcggcccgagcggtcggaccttgtcttcgaggaagaggacctcccc
tatgaggaggagatcatgcggaaccagttctctgtcaagtgctggctccgctacatcgag
tttaaacaaggtgccccgaaacccaggcttaaccagctgtatgagcgggcgctgaagctt
ctgccctgcagctacaagctctggtaccgctacctgaaggcacgccgggcacaggtgaag
catcgctgtgtgaccgaccctgcctacgaagatgtcaacaactgccacgagagggccttt
gtgttcatgcacaagatgccacgtctgtggctagattactgccagttcctcatggaccag
ggccgcgtcacgcacacccgccgcactttcgaccgtgccctcagggcattgcccatcacc
cagcattcccggatttggcctctgtacctgcgcttcctgcgctctcaccctctgcctgag
acagctgtgcgaggctaccggcgcttcctcaagctgagccctgagagtgcagaggagtac
atcgagtacctgaagtccagcgaccggctggatgaggccgcccagcgcctggccaccgtg
gtcaatgacgagcgctttgtgtccaaggctggcaagtccaactaccagctgtggcacgag
ctctgtgacctcatctctcagaacccggacaaggtgcagtcactcaatgtggatgccatc
atccgcggaggcctcacccgcttcaccgaccagctgggcaagctctggtgctcgctggcc
gactactacatccgcagcggccactttgagaaggctcgggatgtgtacgaggaggccatc
cggaccgtgatgaccgtgcgggacttcacccaggtgttcgacagctacgcccaatttgaa
gagagtatgatcgcagctaagatggagaccgcctcggagctggggcgcgaggaggaggac
gacgtggacctggagttgcgtctggcccgctttgagcagctcatcagccggcggcctcta
ctcctcaacagcgtcttgttgcgccagaacccacaccatgtccacgagtggcacaagcgt
gtggccctgcaccagggccgtccccgggagatcatcaacacatacacggaggcagtgcag
acagtagatcccttcaaggctacaggcaagccccacacgctgtgggtggcatttgccaag
ttttacgaggacaacggacagctggacgatgcccgcgtcatcctggagaaagccaccaag
gtgagcttcaagcaggtggatgacctggcaggcgtgtggtgtgagtgtggcgagttggag
ctccggcatgagaactatgagcaggccttgcagctgctgaggaaggcgacagcactgccc
gcccgccgggccgagtactttgacgcctcagagccggtgcagaaccgcgtgtacaagtcc
ctgaaggtgtggtcaatgctcgccgacctggaggagagcctcggcactttccagtccacc
aaggctgtgtacgaccgcatcctggacctgcgcattgccacgccccagattgtcatcaac
tacgccatgttcctggaagagcacaagtactttgaggagagcttcaaggcgtacgagcgt
ggcatctcgctgttcaagtggcccaacgtgtccgacatctggagctcctacctgaccaaa
ttcattgcccgctatgggggccgcaagctggagcgggcacgggacctctttgaacaggcg
ctggatggctgccctcccaaatatgcgaagacgctgtacctgctgtacgcgcagctggag
gaggagtggggcctggcccggcatgccatggccgtgtatgagcgcgctaccagggccgtg
gagcccgcccagcagtatgacatgttcaacatctacatcaagcgggcggctgagatctac
ggagtcacccacacccgtggcatctaccagaaggccattgaggtgctgtcagacgagcac
gcccgggagatgtgcctgcggttcgcagacatggagtgcaagcttggggagatcgaccgc
gcccgggctatctacagcttctgctcccagatctgcgacccccggacgaccagtgcgttc
tggcagacgtggaaggacttcgaggtccgacacggcaatgaggacaccatccgggagatg
ctgcggatccgccgcagcgtgcaggccacgtacaacacacaggtcaacttcatggcctcg
cagatgctcaaggtgtcgggcagcaccacgggcaccgtgtccgaccttgctcctggccag
agcggcatggatgacatgaagctgctggaacagcgggctgagcagctggcggccgaggct
gagcgggaccagcccccgcgggcccagagcaagatcctgtttgtgaggagcgacgcttcc
cgggaggagctggctgagctggcacagcaggccaacccggacgagatcgagctgggcgag
gacgaggacgaggacgagatggacctggagcccaatgaggtgcggctggagcagcagagc
gtgccggccgccgtgttcgggagcctgaaggaagactga
DBGET
integrated database retrieval system
