Manis javanica (Malayan pangolin): 108399790
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Entry
108399790 CDS
T06054
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X3
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04136
Autophagy - other
mjv04140
Autophagy - animal
mjv04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
108399790 (ATG4B)
04140 Autophagy - animal
108399790 (ATG4B)
04136 Autophagy - other
108399790 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mjv01002
]
108399790 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mjv04131
]
108399790 (ATG4B)
03029 Mitochondrial biogenesis [BR:
mjv03029
]
108399790 (ATG4B)
Peptidases and inhibitors [BR:
mjv01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
108399790 (ATG4B)
Membrane trafficking [BR:
mjv04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
108399790 (ATG4B)
Mitochondrial biogenesis [BR:
mjv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108399790 (ATG4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
108399790
NCBI-ProteinID:
XP_017520260
LinkDB
All DBs
Position
12:complement(253121..276628)
Genome browser
AA seq
402 aa
AA seq
DB search
MHGDDCGISSLKSTLTYDTLRFAEFEDFPETSEPVWILGRKYSLFTEKDEILSDVASRLW
FTYRKNFPAIAGGTGPTSDTGWGCMLRCGQMIFAQALLCRHLGRDWRWTQRKQQPDSYVS
VLSAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHIAM
DNTVVMEDIRRSCRSSLPCAGATASPADSDRHCNGLPAGAEVASRPPWRPLVLLIPLRLG
LTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVGLTDS
CFIPDESFHCQHPPSRMSIGELDPSIAVGFFCKTEDDFNDWCQEVRKLSLLGGALPMFEL
VEQQPSHLACPDVLNLSVDSCDVERLERFFDSEDEDFEILSL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcatggcgatgattgtggtatctcatcacttaaatctactctgacctatgacactctc
cgatttgctgagtttgaagacttccctgagacctcagagcctgtttggatcctgggaaga
aaatatagccttttcacagaaaaggatgagatcttgtccgatgtggcgtcaaggctttgg
tttacatacaggaaaaacttcccagccatcgcagggggaactggccccacctcggacacg
ggctggggctgcatgctgcggtgtggacagatgatctttgcccaagccctgctgtgccgg
cacctaggccgagactggaggtggacacagcggaagcagcagccagacagctacgtcagc
gtcctcagtgcattcattgacaggaaagacagttactactccattcaccagatagcacaa
atgggagttggtgagggcaagtccatcggccagtggtacgggcccaacacagtcgcccag
gtcctcaagaagcttgctgtctttgacacctggagcgccttggcagtccatatagcgatg
gacaacacggtggtgatggaggacatcagaaggtcatgcaggagcagccttccgtgtgca
ggggccactgcgtctcctgcagactccgaccggcactgcaacggcctccctgccggggct
gaggttgccagcaggcccccgtggaggcccttggtgcttctcatccccctgcgcctgggg
ctcacagacatcaacgaggcatatgtggagactctgaagcactgtttcatgatgccccag
tccctgggggtgatcggcgggaagcccaacagtgcccactacttcattggctacgttggt
gaggagctcatctacctggaccctcacacgacacagccggctgtggggctcactgacagc
tgctttattccggatgagagcttccactgccagcacccccccagcaggatgagcatcggg
gagctcgacccgtccatcgccgtgggctttttttgtaagacggaggacgacttcaacgac
tggtgccaggaagtcagaaagctgtcgctgctcggaggtgccctgcctatgtttgagctg
gtggagcagcagccttcccacctggcctgccctgacgtcctgaacctgtctgtagattct
tgtgatgtagagcgattggaaaggttctttgactcagaagatgaagactttgaaatcctg
tccctttga
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integrated database retrieval system
