Manis javanica (Malayan pangolin): 108400565
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Entry
108400565 CDS
T06054
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108400565 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108400565 (PNLDC1)
Enzymes [BR:
mjv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
108400565 (PNLDC1)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108400565 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
108400565
NCBI-ProteinID:
XP_036881893
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MEIGADEFEQNLPLLQELVLGADFVGLDIEFTGLRSKLSRSQQISLFDLPSDWYLKTRQN
VQKFTICQIGLSMFSSIEGESNKYVAHSCNFFLFPTTFGTLDSEFSFQASSVQFLNQYGF
DYNKFLKKGIPYMNEEQEKKITHNILTRKWRTHSSLDKDQIKVVIDEVTRWLDLAEEGDW
MTLPGITGFQAFEVQLVLRQALPNVWTVLTDQGVVVKRVSKQHRWCLENTSCGEEASWKE
KILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLYLHEKLFRPLPVETKYPHEAAYDAFLC
GSVLLKVAHLLLWRVHGTGATPELSFPLYFDMLAPYVNQVNLIRARVPKINFSGPDYPST
RPPILILSARKWPGVSEEQVYREFQNLCKFDVQRLTQSQFLLLTNKFKDARSILKEYRGH
PTLQVSLYRYWRHSPNINCLLQVCGVIAAWALVALLLGRPGS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggagataggcgccgacgagttcgagcagaaccttcctctgctgcaggagcttgtcctg
ggtgcggacttcgtgggtctggacatagagttcaccggccttcgttccaaactgtcccgg
tcccagcagatcagtctttttgacttgccgtctgactggtatctaaagacccgccagaat
gttcagaagttcacaatatgtcagattggattgtctatgttctccagtattgaaggcgag
tcaaacaagtatgtagcccattcgtgtaacttctttcttttccctacaacgtttgggact
ttggattcagaattttctttccaggcttctagtgttcagtttttgaatcagtatggcttc
gactataataagtttctcaaaaaaggaatcccatatatgaatgaagaacaggagaagaaa
atcacacacaacatcctgaccaggaagtggaggacccacagttctctggataaggaccaa
atcaaggtagtgatcgatgaggtgacgcgatggctggacctggcagaggaaggcgactgg
atgaccctccctggtatcactggcttccaggcctttgaggtccagctggtgctgaggcag
gccctccccaatgtgtggacggtgctgacagaccaaggggtggtcgtgaagagagtgagc
aagcaacaccgctggtgtcttgagaacacctcttgtggtgaagaggcctcttggaaagag
aagattcttctctctgcgaggggcttctctgtgtttttccagatgctggtgaaagcccag
aagcccctggtgggccacaacatgatgatggacttgctatacctccatgagaagttgttc
cggccactcccagttgagacaaagtacccacacgaagcagcctacgatgccttcctctgc
ggatcagttcttttgaaggtagcacacctgctgctgtggagagtgcacggcactggggcc
acacctgagctctccttccctctgtacttcgacatgctggctccctatgtgaaccaggtc
aaccttatccgagccagggtccctaagattaatttttctggcccagattatcccagtacc
agaccccctatcctcatcctcagtgccaggaagtggcctggggtcagcgaggagcaagtc
taccgtgagtttcagaatctctgtaagttcgacgtccagcggctcacgcagagccagttc
ctgctcttgaccaataagtttaaagatgctcggagcatcctgaaggagtacaggggccac
cccaccctgcaggtgtccctgtatcggtactggcggcactccccgaacatcaactgcctg
ttgcaggtgtgtggcgtcattgccgcctgggcccttgttgcgcttctgctcggaagacct
gggtcctga
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integrated database retrieval system
