Manis javanica (Malayan pangolin): 108401103
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Entry
108401103 CDS
T06054
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03030
DNA replication
mjv03410
Base excision repair
mjv03420
Nucleotide excision repair
mjv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108401103 (RFC1)
03410 Base excision repair
108401103 (RFC1)
03420 Nucleotide excision repair
108401103 (RFC1)
03430 Mismatch repair
108401103 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mjv03032
]
108401103 (RFC1)
03400 DNA repair and recombination proteins [BR:
mjv03400
]
108401103 (RFC1)
DNA replication proteins [BR:
mjv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108401103 (RFC1)
DNA repair and recombination proteins [BR:
mjv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108401103 (RFC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
RuvB_N
Rad17
BRCT_2
AAA_33
AAA_14
AAA_17
AAA_5
AAA_16
RNA_helicase
AAA_18
AAA_7
nSTAND3
AAA_30
SKI
TIP49
NPHP3_N
AAA_28
Motif
Other DBs
NCBI-GeneID:
108401103
NCBI-ProteinID:
XP_073093831
LinkDB
All DBs
Position
5:141950982..142049476
Genome browser
AA seq
1150 aa
AA seq
DB search
MDIRKFFGAIPSGKNLVSDSVKKNEKTKSAEETLKTKKGIKEIKVNSSCKDDSKQKQPNK
KKRIIYDSDSESEETVQVKNAKKQAEKLPLSSKPGKILRQDPVTYISETDEDDDFVCKKA
VSKSKENGVSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKKM
VASKRREPSQNEAITDDSRLNDAAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKT
KKVRKDPEERETFSLVQANLSKAEKHKYPYKVKTEFSDERKNCSPKKQTKCESSKESQQH
SKSLAHKMEETSSPKASSKLALMKKKESSSSKEAGPMASKRKENVIESKGQTKTPKKTKS
SPTKKESISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLE
SMERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKITDEDGLLNLI
RTMPGKKSKYEIAVEAEMKKEKSKLERTPQKNDQGKRKISPTKKESESKKSRLTPKRNSS
TKSIKKDTNVIWRGLDFKEQEAEETNGDSWARNFTDDGSENKVENLLWVDKYKPTSLKTI
IGQQGDQSCANKLFRWLQHWHRSPSEDKKCGAKFGKFAGKDDGSSFKAALLSGPPGVGKT
TTASLVCQELGYSFVELNASDTRSKNSLKEIVAESLNNTSIKGFYSGGAVHSVSMRHALI
MDEVDGMAGNEDRGGIQELIGLIKNTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVE
QIKGAMMSIAFKEGLKIPPPALNEIILGANQDIRQVLHNLSMWCVRSKALTYDQAKADSH
RARKDIKLGPFDVARKVFAIGEETAHMSLVDKLDLFFHDYSIAPLFVQENYIHVKPVAAG
GDVKKHLMLLSRAADSICDGDLVDRQIRSKQNWGLLPTQAVYASVLPGELMRGYMTQFPS
FPSWLGKHSSSGKHNRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLTSQGVEGV
QDVVTCMDTYYLMKEDFENIMEISSWGGTPSPFSRLEPKVKAAFTRAYNKEVHLTPYALQ
AVKTSRPSTGPALDSEYNDELHEDESQSDEKDQDAIETDAMIKKKTKSSKPSRSEKDKAS
RKGKGKSPKK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggctatacctagtggaaagaaccttgtaagtgactca
gtaaagaagaatgagaaaacaaagtctgctgaagaaactttaaaaacaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagatgactccaaacagaagcaaccaaataag
aaaaagaggatcatctatgattcagattcagaatctgaggagacagtgcaggtgaaaaat
gccaaaaagcaagcagaaaaattgccattgtcttctaaacctggtaaaattctacgccag
gatcctgttacatacatttcagaaacagatgaagatgacgactttgtgtgtaagaaggca
gtctctaaatcaaaagagaatggagtttctacaaatagttatcttggagcatcaaacatg
aaaaagaatgaagaaaacactaagaccaaaaataagcctttatcaccaatcaaacttacc
cccacatcagtccttgattattttggaacaggaagtgtccaaagatcagataagaagatg
gtggcaagcaaaagaagagagccttcacaaaatgaagccatcacagatgattccagatta
aatgatgcagccatcgccaagcaattgcaacttgatgaagatgcagagttggagagacaa
ctgcacgaagatgaagagtttgccagaacattagccatgttggatgaagaacccaagacc
aaaaaggttcgaaaggacccagaagaaagagaaacattttcattggttcaagccaattta
agtaaagcagaaaagcataaatatccatataaagtaaaaacagaattttcagatgaaaga
aagaactgtagtcctaagaagcaaactaaatgtgaaagttcaaaagaatctcagcaacat
tccaagtcattagctcacaaaatggaagaaacttcttctccaaaagccagttccaagcta
gcacttatgaaaaaaaaagaatcaagttcttctaaagaagcagggcctatggcttcaaaa
agaaaagaaaatgtcattgaatcgaaaggacagacaaaaacacctaagaaaaccaaaagt
tctccaactaaaaaagagtctataagtcctgaagattctgaaaagaggcgcactaattat
caagcttatcgaagctacttaaatcgagaaggtcccaaagcactgggctccaaagaaata
ccaaagggagctgaaaattgcttggaaggccttatatttgtaatcacaggagtgctggag
tccatggaacgagatgaggccaagtctctaattgagcgttatggggggaaagtaacagga
aatgtcagcaagaaaactaactaccttgtcatgggtcgtgatagtggacagtcgaagagc
gataaggcagcagccttggggacaaaaattactgatgaagatggcttgttgaatctgatt
cgaactatgccaggcaagaagtccaagtatgaaatagcagttgaagctgagatgaagaaa
gaaaagtccaaattggaaagaacaccccaaaaaaatgaccaaggaaaaagaaaaattagt
cctactaagaaggaatcagaatctaaaaagagcagattgactcccaaaaggaacagctct
acaaagtccataaaaaaggacacaaatgtgatttggagaggcctggacttcaaggagcag
gaggctgaggagacaaatggtgacagctgggctaggaatttcactgatgatggcagtgaa
aacaaagtggaaaatttgctctgggtggataaatataagccaacctcgctcaagaccata
attggacagcaaggtgaccagagctgtgccaacaaactctttcgctggctccaacactgg
cacaggagcccatctgaagataagaaatgtggagcaaagtttggtaaatttgctggcaaa
gacgatggctctagttttaaggcagcgttgctctcaggccctccaggtgttggcaaaacc
accacagcttctctggtttgtcaggaattgggatatagcttcgtggaactgaatgcaagt
gatactcggagtaaaaacagcttaaaggagattgttgctgaatcactaaataataccagc
atcaagggcttttattcaggtggagcagtccattcagtaagcatgagacatgctctcatc
atggatgaagtagatggcatggcaggcaatgaagacaggggaggaattcaggaattaatt
ggcctgataaaaaacacaaaaatccccattatctgtatgtgtaatgatagaaatcatcct
aagattcgttctttggttcattattgttttgatcttcgttttcaaaggcctcgagttgaa
cagattaagggtgctatgatgtctattgcatttaaagagggtttaaagatcccacctcca
gctttgaatgaaataatcttgggagccaatcaagatatcagacaggtattacacaatctg
agtatgtggtgtgtacgcagtaaggcactaacctatgatcaggccaaggctgattctcat
agagccagaaaggatatcaaactgggcccatttgatgttgcccggaaagtgtttgcaatt
ggagaggagactgctcatatgtcacttgtggacaaattagatctcttttttcatgattat
tcaatagcacccctctttgtccaagagaactacatacatgtgaagcctgtagctgcaggg
ggtgatgtaaaaaagcacttgatgcttttaagcagagcagcagatagcatatgtgatggc
gacctagtggaccgtcagatcagaagtaagcaaaactggggtcttctgcccacacaggct
gtttatgccagtgttcttcctggagagttaatgagagggtacatgacccagtttcccagc
ttcccaagctggttggggaagcactcatcttctggcaagcacaatcgtattgttcaggac
ctagcactacatatgagtctcagaacttactccagcaaaaggactgtaaacatggattat
ctgtcacatataagggatgcacttgtacagcccttgacctcacagggagttgaaggagta
caagatgttgttacttgtatggacacatattatttgatgaaagaagactttgagaatatc
atggaaatcagcagctggggaggcacacctagtcccttctccaggctggagcccaaggtg
aaagcagcctttacaagagcgtacaataaggaagtgcaccttactccgtatgcactgcag
gcggtaaagacatccagacccagcacaggcccagccctggattctgaatacaatgatgag
ttacatgaagatgagtctcagtccgatgagaaagaccaggatgctatagagactgatgct
atgatcaagaaaaagacaaaatcttcaaagccttcaagatcagaaaaagataaggcgtcc
agaaaaggaaaaggaaaaagtccaaagaaatga
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integrated database retrieval system
