Manis javanica (Malayan pangolin): 108401291
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Entry
108401291 CDS
T06054
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108401291 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108401291 (CDC40)
Spliceosome [BR:
mjv03041
]
Complex C
Other components
Step II factors
108401291 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
108401291
NCBI-ProteinID:
XP_017522631
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSAAIASLAASYGSGSGSESDSDSEGGRCSLPAADALMHLSQSPSAKPALAVAVDAAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSTKYIGSVEEAEKNQGLTVFETGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKDAARPSEEEQRELDEITAKRQKKGKQEDERPGDEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFSTAGTQFLSAAYDRYLKLWD
TETGQCVSRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCVGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgcgatcgcgtcgctggctgcttcctacggttcgggctcagggtccgagtcg
gactcggacagtgagggcggacggtgctcgctgccggccgccgacgccctcatgcacctg
tcccagtcgccgtcggccaagcccgctctggcggtggcggtggacgcggccccggaggtg
gcggtcaaggaagacttggagaccggagttcacctggatcctgcagtcaaggaggtccag
tataatcccacctatgagacaatgtttgctcctgagtttggaccagaaaatccctttagg
acgcagcagatggctgcccctagaaatatgctttctggatatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaagaagaacttttgccacatacggttatgcattagac
ccttcgttagataatcatcaggtgtctactaaatatattggttctgtagaggaagctgaa
aaaaatcaaggtttaactgtgttcgaaactggtcagaagaaaacagaaaagaggaaaaag
ttcaaagaaaatgatgcttctaatattgacggcttcttgggaccatgggcaaaatacgtg
gatgaaaaagatgcagccagaccttcagaagaagaacaaagagaattggatgaaatcaca
gccaagaggcagaagaaaggcaaacaggaagacgagagacctggggacgagaagacgatc
ttacatgttaaagaaatgtatgactatcaaggcaggtcctatctccacatccctcaggac
gttggtgtgaacctgcgctcgtctgtgccacccgagaagtgctaccttcccaaaaagcag
atccacgtgtggtccggacacacaaagggcgtcagcgccgtcagactgtttcctctctct
ggccatctgctgctctcctgctccatggactgtaagatcaagctgtgggaggtttatgga
gacaggcgctgtctgcgaacatttattggccacagcaaagctgtcagggacatctgcttt
agcacagcagggacgcagttcctcagtgcagcttatgacaggtacctgaagctctgggac
actgagacaggacaatgtgtatccagatttacaaaccgaaaagtgccttactgtgtcaag
ttcaatcccgatgaagacaagcaaaatctctttgtggctgggatgtctgacaagaagata
gtgcagtgggacatccgaagtggagaaatcgtgcaggaatatgaccggcatttgggggct
gtcaacaccatcgtctttgtcgatgagaacaggaggttcgtgagcacgtctgacgacaag
agcctccgagtgtgggaatgggatatccctgtggatttcaagtacatagcggagcccagc
atgcactcgatgcctgcagtgaccttgtctccaaacgggaaatggctagcatgccaatca
atggacaatcaaatcttgatttttggagcacaaaacagatttagattaaataagaaaaaa
atctttaagggccatatggtagcaggctatgcttgtcaggtggacttctccccagacatg
agctatgtgatttcaggagatggaaatggaaaattaaacatctgggactggaagactacc
aagctctacagtcggttcaaagcccacgataaagtgtgcgtgggtgcagtgtggcaccct
cacgagacgtccaaagtcatcacatgcggctgggacgggctcatcaagctgtgggattag
DBGET
integrated database retrieval system
