Manis javanica (Malayan pangolin): 108401312
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Entry
108401312 CDS
T06054
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04151
PI3K-Akt signaling pathway
mjv04382
Cornified envelope formation
mjv04510
Focal adhesion
mjv04512
ECM-receptor interaction
mjv04518
Integrin signaling
mjv04820
Cytoskeleton in muscle cells
mjv04926
Relaxin signaling pathway
mjv04933
AGE-RAGE signaling pathway in diabetic complications
mjv04974
Protein digestion and absorption
mjv05146
Amoebiasis
mjv05165
Human papillomavirus infection
mjv05200
Pathways in cancer
mjv05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108401312 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108401312 (COL4A2)
04518 Integrin signaling
108401312 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108401312 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108401312 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
108401312 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
108401312 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
108401312 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108401312 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
108401312 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
108401312 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
108401312 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108401312 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mjv04147
]
108401312 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
mjv00536
]
108401312 (COL4A2)
Exosome [BR:
mjv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108401312 (COL4A2)
Glycosaminoglycan binding proteins [BR:
mjv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108401312 (COL4A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108401312
NCBI-ProteinID:
XP_036880744
LinkDB
All DBs
Position
9:complement(2230396..2387986)
Genome browser
AA seq
1712 aa
AA seq
DB search
MDGDRCPASSAALRRWLLLGAVTVGLLAQGVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGPPGIAGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGPPGHDGCNGTIGDSGYVGPHGPEGRRGPPGPEGPKGQKGEPYALSSEDRD
KYRGEPGEPGLVGFQGPPGHPGPIGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKG
EKGDMGQPGPNGIPLDTHYAGTGPTSEIFRPDQYKGEKGSEGEPGRKGISLKGEEGIVGF
SGPRGAPGFDGEKGSPGQKGSKGLDGYQGPDGHPGPKGEAGDPGPAGPPAYSPHPSLGKG
ARGDPGFPGTHGEPGSRGEPGDPGPPGPPGTPVGGEDEKRGFQGEMGPKGFIGEPGLPAL
YPGPPGADGTPGLRGAPGPAGPPGPDGFLFGLKGADGRAGYPGLSGFPGARGQKGWKGDA
GDCKCAEDDQFIRGIPGLPGSKGFPGLNGEPGKKGGQGDPGQHGIPGFPGFKGAPGDTGP
PGPKGLKGDSRTVTTKGERGQPGVPGVPGLKGDNGIPGRDGLDGFPGLPGPPGDGIKGPP
GDAGHPGAPGTKGVPGEMGPPGRGLPGPKGEHGFPGDVGTPGPPGFPGPPGPPGTPGQID
CDTGVKRPIGGDGQETLQPGCVGGPKGLPGLPGPRGPPGAKGLRGMQGPSGADGEPGLKG
FPGDPGREGFPGPPGFVGPRGAKGAVGLPGLDGQPGPTGLPGPVGPPGDRGLPGEVLGAQ
AGSRGDAGLPGHPGLKGLPGERGTPGFRGSQGMPGMPGLKGQPGFPGPSGSPGLPGPPGQ
HGFPGAPGQQGPLGLPGAAGRGGLPGDRGDPGDTGVPGPVGMKGVSGERGDPGSLGERGH
PGSPGFKGVAGMPGIPGSKGSRGSPGMDGFQGMLGLKGRPGFPGNKGEVGVFGVPGLKGL
AGEPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGVKGSSGMPGIPGLS
GVPGSPGRPGYIKGVKGDIGVPGSPGSPGFPGVSGPPGIIGFPGFTGSRGDKGAPGRAGL
YGETGPTGEFGDIGDTIDLPGSPGLKGERGLAGAPGLKGFFGERGTEGEVGFPGITGLTG
VQGPPGLKGQTGFPGLTGLQGPQGEPGQVGVPGNKGDFGWPGAPGLPGFPGIRGIGGLHG
LPGTKGFPGSPGADIHGDPGFPGPAGDRGDPGEANTLPGPVGAPGQKGEQGVPGERGPVG
SPGLQGFPGITPPSNISGSPGDKGAPGIFGLEGYRGPQGPPGPAALPGSKGEEGNPGVLG
SPGTKGWGGDPGPQGRPGVFGLPGDKGPRGEQGFMGNIGATGSVGDRGPRGPKGDRGLPG
APGPVGSPGIAGIPQKFAIQRGPMGPQGRRGPPGAQGELGPQGPPGEPGFRGAPGKVGSQ
GRGGVSAVPGFRGDQGPVGHQGPTGQEGEPGRPGSPGMPGMPGRSVSIGYLLVKHSQTDQ
EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASR
NDKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLW
IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP
EQSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggacggagaccggtgcccggcgtccagcgctgccctgcggcggtggctgctgctgggg
gccgtgaccgtggggctcctggcccagggcgtcctcgcgggtgtgaagaagtttgacgtg
ccctgcggagggagagactgcagcgggggctgccagtgctaccccgagaaaggagggcgg
ggccagccagggccagtaggcccccagggctacaatgggcccccagggctccagggattc
ccaggactgcagggccgcaaaggcgacaagggcgagaggggcccgcccggcatcgcagga
ccgaaaggagacgtgggcgcgagaggtgtttctggattccccggtgccgatggaataccc
ggacatcctgggcagggtggccccagaggacctcctggccatgacggctgcaatgggacc
ataggagactccggctacgtgggaccccacgggcctgaagggcggcgtggccctcccggg
cccgaaggacccaaggggcagaaaggcgaaccttatgcactgtccagcgaggaccgtgac
aagtaccggggtgaacctggagagcctggattggtcggcttccaggggcctcccggccac
cccgggcctatcgggcagatgggtcctgttggagctccaggaagaccgggcccgcctgga
ccccctggaccaaaaggacagccaggcaacagaggacttggcttttatggggaaaagggc
gagaagggcgacatgggacagccaggacccaatgggattccgctagacacccattatgcc
ggcacaggacccacaagcgaaatattccgtccggatcaatataagggtgaaaaagggagt
gagggggagccaggaaggaagggcatttccttgaagggagaagaaggaatcgtgggcttt
tcgggaccccggggcgctcctggcttcgatggcgaaaaaggttcaccaggacaaaaagga
agcaaaggcctggatggttaccaaggccctgacggacacccaggacccaagggagaagcg
ggtgacccgggccccgcaggaccacctgcctactctcctcatccctccctggggaaaggt
gccagaggtgatcctggattcccagggacccacggggagccaggcagcaggggtgaacca
ggagaccccggcccaccaggcccccctggcacgcccgtcggaggggaagatgagaagaga
ggcttccagggcgaaatgggacccaaaggcttcataggagaaccgggcctccctgcgctg
tacccgggcccaccgggagctgacggaacaccagggctgcggggagccccggggcctgcc
ggaccgcccggaccagacggtttcctcttcggcctgaagggagcggatggccgggcaggc
taccctggactctccggcttcccgggggcgcgcgggcagaagggctggaaaggtgacgct
ggcgactgtaaatgtgcagaagatgatcagttcatcaggggtattccggggctcccagga
tccaagggcttcccaggcctcaatggggaacccgggaagaaagggggccaaggagacccg
ggtcagcatggcatccctgggttcccggggttcaagggggcccctggtgacactggacct
cctgggcccaagggattgaagggagattctagaacagtcaccacgaaaggtgagagggga
cagccaggtgtcccaggtgtgcctggcctgaaaggtgacaacggcatcccagggcgtgac
gggctggatggattcccgggcctcccaggccctcctggtgatggcatcaaaggcccccca
ggggacgcaggtcaccccggggcacctggcacgaagggcgttccaggagaaatgggaccc
ccaggacggggcctgccaggccccaaaggcgagcatggctttcctggagatgtcggaact
cctgggccgccaggcttcccaggcccccctggccccccaggcactccaggacaaatagat
tgtgatacgggagtgaagaggcccatcggaggtgacggacaggagaccctccagccaggc
tgtgttggagggcccaaaggactgccaggcctaccgggacctcgtggccccccaggggcc
aaaggtctcagaggaatgcagggaccctcgggagctgatggggaaccggggctcaagggt
ttcccaggagacccaggtcgcgaaggattcccaggacccccagggtttgtggggccccga
ggagccaaaggtgccgtgggcctccctggcctggatggacagccaggccccaccggcctg
ccagggccggtagggcccccaggggacagaggccttcctggagaagtcctgggagcccag
gccgggtcccggggggatgccgggctgcctggacaccccgggctgaaaggccttccggga
gagagaggcacgccgggattcagggggagccagggcatgccaggaatgccaggcctgaag
ggccagccgggcttcccagggccttcgggctctccaggactgcctgggccgccaggacag
cacggcttcccaggagctccaggccaacaggggccactggggctgccaggcgccgcaggc
cggggaggtctgcctggggaccgaggagacccaggcgacactggtgtccccggccctgtg
ggcatgaagggtgtgtctggtgagagaggtgaccctggttccctgggtgagagaggccac
cccggaagccctggattcaaaggagtggctgggatgcctggcatcccggggtccaaaggg
agtagaggctcgcccgggatggacggcttccaaggcatgctggggctcaaaggcagaccc
gggttcccagggaacaaaggagaggtcggagtctttggcgtcccggggctaaagggcctg
gctggtgagccaggcgtgaaaggcagccgaggggaccccggccccccaggaccacctccc
atcatcctgccaggaatgaaggacatcaaaggggagaaaggagacgaaggacctatggga
ctgaaggggtacctgggcgtgaaaggttcttctgggatgccagggatccctgggctgtcc
ggagtacctgggtcgccggggaggccgggctacatcaagggagtcaaaggagacatcgga
gttcccggctcgcctggttcgccaggattccctggcgtttccggaccccctgggattata
gggtttccaggattcacaggaagcaggggcgacaagggggctccggggagagcaggcttg
tacggcgagacgggtcccacgggggagttcggtgacattggcgacaccatagacttaccg
ggaagtccaggcctgaagggagaacggggcctcgccggcgctccaggtctaaaggggttc
tttggcgagagaggaacggagggtgaagttggcttccccgggataacaggcctgaccgga
gtccaaggcccgcccggcctcaaagggcaaacaggctttccaggactgacggggctgcag
gggcctcagggagagccaggacaggtcggggtgcccggcaacaaaggggattttggctgg
ccaggggctccaggcttaccaggtttccccggcatccgcggcatcgggggactgcacggc
ttgccaggcaccaaaggctttccaggatccccaggtgcagacatccatggagacccaggt
ttcccaggtcctgctggggacagaggtgacccaggagaagccaacacccttccaggccct
gtcggagcaccaggacagaaaggggagcaaggagttccaggggagcgaggcccagtcggg
agcccaggactgcagggatttccaggcatcacccctccttccaacatctctgggtcacct
ggtgacaaaggagccccagggatattcggcctggaaggttaccgaggcccgcagggcccc
ccagggcctgctgctcttccgggaagcaaaggagaagaagggaaccccggagttctggga
agcccaggaaccaaaggatggggcggggaccccgggccccagggccggcctggcgtgttc
ggtctcccaggagataaagggcccaggggtgagcaaggattcatgggaaacataggcgcc
actgggagcgtgggcgaccgaggccccaggggacccaaaggagaccgcgggctcccaggt
gcccctgggcctgtggggtccccgggcattgcaggaatcccccagaagtttgccatccag
cgggggccaatgggcccccagggaaggagaggccccccgggggcccaaggagagctgggg
ccccagggccccccaggagaaccaggtttccgtggggctccagggaaggtggggtcccag
ggaagaggtggagtatctgctgttcctggattccgaggagaccaggggcccgtgggacac
caggggccgaccggccaggaaggggagccaggccgccccgggagccccggcatgcccggc
atgcctggccgcagtgtcagcatcggctacctgctggtgaagcacagccagacggaccag
gagcccatgtgccccgtgggcatgaacaagctctggagcggatacagcctgctgtatttt
gaaggccaggagaaagcccacaaccaggacctagggctggcgggctcctgcctggctcgc
ttcagcaccatgcccttcctgtactgcaaccctggggacgtctgctactacgccagccgg
aacgacaagtcctactggctctccacgaccgccccgctgcccatgatgcccgtggccgag
gacgagatcaagccctacatcagccgctgctctgtgtgcgaggccccggccgtcgccata
gcggtccacagccaagatgtctccattccccactgcccagccggatggcggagtctgtgg
atcggatattccttccttatgcacacggctgcgggcgatgaaggtggcggccagtccctg
gtgtcgccgggcagctgcctggaggacttccgtgccacgcctttcattgagtgcaacggg
ggccgcgggacctgccactactacgccaacaagtacagcttctggctcaccaccatccca
gagcagagcttccagggctcgccctccgccgacaccctcaaggccgggctcatcaggaca
cacatcagccgttgccaggtgtgcatgaagaacctgtga
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