Manis javanica (Malayan pangolin): 108401325
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Entry
108401325 CDS
T06054
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mjv03036
]
108401325 (TDRD12)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
108401325 (TDRD12)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108401325 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
108401325
NCBI-ProteinID:
XP_017522682
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MAEAGPACVVASEAPSEGAMTGRPGEGRGRGGQGLAGASPEAGLPRAGRMLEVLVLKVED
PGCFWVVIKGCGPSSDHEADYRKLNSAMNDFYNSMCQDIEIKPLMLEEGQVCVVYCQELR
GWCRAIIKSIMSSADHCLAECFLVDFAKHIPVKSKNIRVAVETFMQLPYRAKKFRLYCTK
PVTLHIDFCEDNAEIVPAKKWDSAAIQYFQNILKATTQVEAEVCAVEEDTFEVYLYVTIK
NEKVCVNDDLVAKNFACYISPKEDKNLDSSENPRLNIKSASFSNKLNPALTLWPMFLQGK
DSQGMKNAHGLAFLVPSLQHPWPRGVVRDLAPTATILDKAIKCDMNSLRASPKTKSEKEQ
QCISLKDVNKCVASSVYWPAERGIAIYAEPDTPATSALCQKSNEKLLRLAEKKEYNEKNG
CVKLLQFLNPDPLKADGISDLEQLQKLKLGSAQPSVMLRNKIEPCRSIDVSPLSADLKKA
LLRRKFPGPSHTESYSWPPIARGCDVVVISHCGKDPFLYLPPVLTILQTGGCYKSLPSRN
GPLAVIVCPGWKKAQFIFELLGDYTVSSRSLHPVLLTIGLHKDEAKNVKLPKGCDIIVTT
PDSLLRLLKYQSLLFLRLCHLILDEVEVLFFEANEQMFAILDNFKKNIEVEERESAPHQI
VAVGVHWSKHIEHLVKEFMSDPYVVITAMEEAALYGGVQQVVHLCLESEITSALLQTLDY
IPSQAQKTLIFTCSVAETEIVYKVVKSSSMFCLKMHKEIVFNLKSVLEQWTKKLSSGSHL
VLVLTDDCIPLLAITDATCVIHFSFPSSPKIFGGRLCCMSDHFQSLTKQGSPAEQGNKKT
KSVLLLTDRNACHAVSILRYLERADATIPSELYEFTAGVLEAKENRKAKQPLCPCLKAFG
FCKDKRICPDRHRINPEIDMPVRLSNQTLPVSGYIKIIPFYISNATNYFGRIVDTHVDLY
ATLNAKMNEYFEDSGNKTTVENVAKFELYGLAEKTLFHRVQVLELSQKEGAWAPDGVLVR
FIDEGRTGLVTTDQLLHLPGNFHTLPPQAVEFIVCRVKPADNETEWNPKVTGYIHHKIIG
KLHDAKVILALGNTLWIDPMVHITKLPNLKTSVIDYNVRAEILSMGMGIDNSEHIEQLKK
FYEGAKMPSFEESPSQTLMPPSADEATGLQSTPREGRGPDRGADPETHSEDQKHETLPEN
TGDAPLNKTTEPLKSFHPQIKWFQKEDVVILKISIRNVKDYKCKYFRDRVVFSAWVGEKF
YLADMELHASITKDDCKCVLQNDEPVITLAKERRESWCRLLKQKNPNVAFDFDHWEESDD
DGHFSEGKWGALPPWRKPGSQGGGRKHPADCRKAAFVEMGC
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcaggccctgcctgcgtcgttgcctccgaagctccttccgagggcgcaatg
accgggagacccggagaggggcgcggccgcggcggccagggccttgccggggcgagtcca
gaggcaggcctgccgcgcgcggggaggatgctggaggtgctggtgctgaaggttgaagat
ccaggatgtttctgggtggttataaaagggtgtggtccctcttcagaccatgaagctgac
taccgcaaactaaacagtgccatgaatgacttctataatagcatgtgtcaagatatagaa
ataaaaccattaatgttggaagaaggtcaggtttgtgtggtttattgtcaggagctaagg
ggctggtgcagggctattattaagtcaattatgtcttcagccgaccactgcctggcagaa
tgtttccttgtggattttgccaagcacattccagtgaaatctaaaaacatccgagttgca
gtagaaacttttatgcagcttccctacagagcaaaaaaattcagactgtattgcacaaag
cctgttacgttacacattgacttctgtgaagacaatgcggaaattgtacctgccaagaag
tgggacagtgcagctattcagtactttcagaacattctaaaagcaacaacccaggtggaa
gccgaagtatgtgctgtggaagaagatacttttgaggtttacctttatgtaactataaaa
aatgaaaaagtctgtgttaatgatgatctggttgcaaagaacttcgcgtgttatatatca
cccaaggaggataaaaaccttgattcttcagagaacccaagattgaatataaagtcagca
tccttttccaataaacttaatccggcgcttactctttggccaatgtttttgcaaggaaaa
gattctcaaggaatgaaaaatgcacacggattagcatttctggtgccgtctctccagcat
ccgtggcccaggggtgttgtcagggacctggcgccgactgccaccatcctggataaagct
ataaaatgtgatatgaattcattgagagcttcacctaaaacaaaatctgaaaaggaacaa
cagtgcatctctttaaaagatgtaaataagtgtgttgcatcttcagtgtactggccagca
gaaaggggcatagccatatatgctgaaccagatacgccggcaacaagtgctttatgtcag
aagtcaaatgagaaactgcttagattggctgagaagaaagaatataatgagaagaatggc
tgtgtgaaattgttgcagtttttaaatcccgatcccttgaaagctgatggaatctctgac
ctggaacagttgcagaagttgaagttgggctcagcgcagccctccgtgatgctccggaat
aagattgagccttgccgatccattgatgtatccccgctttcagcagacctgaaaaaggct
cttctaagacgtaagtttccaggacctagccacactgaatcttactcttggcctccaata
gctcgtgggtgtgatgtggtagtcatttctcactgtgggaaagaccctttcctgtacctt
ccaccagtgctcaccattttgcaaacagggggctgctacaagtcattaccaagtagaaat
ggacctctggcagtcatcgtgtgccctgggtggaaaaaggcccagtttatctttgaatta
ttgggagactataccgtgtcctccaggtctcttcatcctgtgttattaacaataggtctc
cacaaagatgaagccaaaaatgtgaagctcccaaagggttgtgacataattgttacaaca
ccagatagcctcctgagacttctcaaatatcaaagtttattatttcttagactctgtcac
ctaattttggatgaagtggaagtattattctttgaagctaatgaacaaatgtttgctata
ttagataacttcaaaaaaaatattgaagttgaagaaagagaatctgcaccacatcagatt
gttgcagttggagttcattggagcaaacacatagagcatttggtcaaggagtttatgagt
gacccctacgttgtgatcacggccatggaagaggctgctctctatggtggtgtccagcag
gtagtgcatctgtgcctagaaagtgaaataacctctgctttactccaaactcttgattac
attccaagtcaggctcaaaagaccttgatcttcacctgttctgtagctgaaacagaaata
gtgtataaggtagtaaaaagcagttcaatgttttgtttgaaaatgcataaagaaatagtt
tttaacttaaaaagtgtcttagaacagtggacgaagaagttaagttctggctctcacctt
gtattagtcttgactgatgattgcataccactcttggccatcactgatgccacatgtgtg
attcacttcagctttccttcctcgccaaaaattttcggtggacgcctatgctgcatgtct
gatcattttcagagtttaaccaaacagggttctcctgcagaacagggcaataaaaaaact
aaatctgtcttgctgctgacggacagaaacgcatgccatgctgttagcatcctgcgctac
ctggagcgagcagatgccacgattccttcagagctgtatgagtttaccgcaggcgttctg
gaagccaaagaaaacagaaaagccaagcagcctctttgtccatgtcttaaggcttttggt
ttttgcaaagataaaaggatctgtcctgatcgacaccgtattaacccagaaatagacatg
ccagtgaggttatccaaccaaactctaccagtgtctggatatattaaaataatacccttt
tatatttcgaatgcaacaaattattttggtcgtattgtcgatacacatgtggatctttat
gcaactcttaatgccaaaatgaatgagtattttgaggattctggtaataaaacaactgtt
gaaaatgtggcgaaatttgaattatatggattggcagaaaaaacactttttcacagggtc
caggtgctggagctgagccagaaggaaggtgcgtgggccccggatggcgtccttgtaagg
tttatagacgaaggcaggactggactcgtcacaacggaccagttgctgcatctcccaggg
aatttccacaccctgcccccacaggctgtggagtttattgtttgcagagtgaaacctgca
gacaatgaaactgaatggaatccaaaggttactgggtatattcatcataaaattattgga
aaacttcatgatgcaaaagtgatactggctctaggaaatacactttggattgatccaatg
gtacacattacaaaactcccaaatttgaaaacttctgtcattgactataatgttcgagct
gaaattttgtcaatgggaatgggcattgataattcagaacatatagaacaactgaaaaaa
ttttacgaaggagctaaaatgccaagttttgaggaaagcccaagccaaaccctgatgcca
ccttccgcagatgaggccacaggtctgcagagcacgccacgggagggcaggggcccggac
agaggtgctgaccccgagacacactcagaagatcagaagcatgaaactttgcctgaaaac
actggagatgctcctcttaacaaaactacagagcctctgaaaagcttccacccacaaata
aaatggttccaaaaggaagatgtagtcatattgaagataagcataaggaatgtaaaagat
tataaatgtaaatattttagagatagagttgttttcagtgcctgggtaggagagaaattt
tacttggctgatatggagctgcatgccagtataacgaaagatgactgcaaatgcgtcctt
cagaacgatgaacctgtaatcactcttgcaaaagagagaagggaatcttggtgtcgctta
ctcaaacagaagaaccctaatgtggcttttgattttgatcactgggaagaaagtgatgat
gatggccacttctcggagggtaagtggggtgcactgcctccctggagaaagcctgggagc
caagggggtgggcgtaagcacccagctgattgtaggaaggcagcctttgtggaaatgggt
tgttaa
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