Manis javanica (Malayan pangolin): 108402230
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Entry
108402230 CDS
T06054
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108402230 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108402230 (PAN2)
Enzymes [BR:
mjv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
108402230 (PAN2)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108402230 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
108402230 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_CDC20-Fz
WD40_like
Motif
Other DBs
NCBI-GeneID:
108402230
NCBI-ProteinID:
XP_017524085
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MNFEGLDPGLAEYAPAMHSALNPVLDAHLNQSLLQNVELDPEGMALEALPGQESVHIMEG
VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGCHRGHATSFFGPALERYSSFQVNGSDDIR
QIQSLENGILFLTKNNLKYMARGGLIMFDYLLEDSEDMHSLLLTKSSTLLVAGLQSHILE
IDLNTVQETQKYAVETPGVTVMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS
DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
PEPSFNPYSRETEFALPCVVDSLSPLDWSQDLLPLSLVPVPLTTDTLLSDWPAANSSPAP
RRAPPVDAEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKESESEFDSFSQVTESLIGREE
EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLIQSHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEASGKGNLARLIQRWNRFILTQLHQDMQELEVPQAYRGAGGSSFCSSGDSVIRQLFSCE
MENCSLCRCGSETVRASSTLLFTLSYPEGSNNDKTGKSCDFAQVLKRSICLEQNTQAWCD
TCEKYQRTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKQRGGETSTNKE
FALADWKELGHPEGVLMCPSIEELKNVWLPFSIRMKMSKSKGLDVCNWTDGDEMQWGPAR
AEEQHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQCKEGVTHQQWYLFNDFLIEP
IDKHEAVQFDMNWKVPAILYYIKRNLNSKYNLNIKNPIEASVLLAEASLARKQRKTHTTF
IPLMLNEMPQLGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNE
GIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFV
GHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDA
RTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVL
AL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgaaggtctggaccctggactagcggagtatgccccagccatgcattctgcc
ctcaaccctgtcctggatgcccatctgaaccaaagtctgctacagaatgtggagctggac
ccagagggaatggccttggaggctcttcccggccaggagtcagtacacataatggaaggt
gtctactctgaattgcacagtgtggtggctgaagtgggtgtgcctgtctccgtctcccac
tttgacttgcacgaggagatgctgtgggtgggatgccataggggccatgccacttcgttt
tttggcccagctttggagcgttactcatcctttcaggtcaatggcagtgatgatattcgg
cagatacagagcctggagaatggtatcctttttctcaccaagaacaacctcaagtatatg
gcccgtgggggcctcattatgtttgactacctgctggaggacagtgaggacatgcacagt
ctcctgctaaccaagagcagcactctgcttgttgctgggctgcagagccacattttggaa
attgaccttaacactgtccaggagactcagaagtatgcagtcgagactcctggagtcact
gtcatgaggcagacaaatcgcttcttcttctgtggccacacatctggcaaggtttccctg
cgagacctccgtacctttaaggtggagcatgagtttgatgctttctcagggagtctctcg
gattttgatgtgcatggcaacctgctggctgcctgtggcttctcgagccgcctcactggc
ctggcctgtgaccgtttcctcaaggtgtatgatctgcgcatgatgcgtgccatcacccca
cttcaggtgcatgtggatcctgccttcttgcgcttcatacccacatatacttctcgtctt
gctatcatctcccagtcagggcagtgccagttttgtgagcccacaggcctggctaaccca
gcggacatcttccatgtgaatcctgtggggcctctgctcatgacgtttgatgtatcagcc
agcaagcaggccttggcctttggggattctgagggctgtgtgcacctctggactgattcc
cctgagccttccttcaacccctactcccgagagaccgagtttgctttgccctgtgtcgtg
gactcactgtcgcctctggactggagccaggacttgctgcctctttccctcgtccccgtt
ccactcaccactgatacactgctctctgactggcctgctgccaactcctctccggcgccc
aggcgagcaccccctgtagacgcggagattctgcgcaccatgaagaaggtgggcttcatt
ggctatgcgcccaacccccgcaccaagctgcgcaatcagattccttaccgactcaaagag
tcagagagtgaatttgacagcttcagccaggtcactgagtcactcatagggcgtgaagag
gagccacatctccacatggtctccaagaaataccgcaaggtgactatcaaatactccaag
ctagggctggaggactttgacttcaaacactacaataagaccctgtttgctggattagag
ccccacatccccaatgcctactgtaattgcatgattcaggtgctgtatttcttggagccc
gttcgctgtctaatccagagccacctgtgccagaaagagttctgcctggcatgtgagctg
ggcttcctcttccacatgttggacctctcccgtggtgacccttgccagggcagtaatttt
cttcgggcgttccgcaccattcctgaggcctcagccctcggtctgatcctggccgactca
gatgaggcatcaggcaagggcaatctggccaggctcattcagaggtggaatcgcttcatt
ctcactcagctgcatcaggatatgcaggagctggaagtaccccaggcttatcgaggtgct
ggtggcagcagcttttgctcctcgggggactctgtcattaggcagctgttcagctgtgag
atggaaaactgcagcctgtgccgctgtggcagtgagactgtgcgggcctcctccaccctg
ctcttcacgctttcctaccctgagggcagcaacaatgataaaaccgggaagagctgtgac
tttgctcaggtgctgaagcgaagcatctgcctggagcagaatacacaggcctggtgtgac
acctgtgaaaagtaccagcgcacgattcagacccgcaacatccgccatctgccagatatc
cttgtcatcaactgtgaggtgaacagctcgaaagaagcagacttctggagaatgcaggct
gaagttgccttcaagatggcagtgaagcaacgtggtggggaaacctctacaaacaaggaa
tttgctctggctgattggaaggaactagggcatccagagggcgtgctgatgtgtccctcc
attgaggagttgaagaatgtctggcttcctttctccattcgcatgaagatgagcaagagc
aaagggctggatgtttgcaattggactgatggggatgagatgcagtggggcccagccagg
gcagaggagcagcatggtgtctatgtgtatgacctgatggctactgtagtacacatcctg
gactcacgcacagggggcagcctggtggctcacatcaaagttggagagacctaccaccag
tgcaaggagggtgttacccaccagcagtggtatctcttcaatgattttcttattgaacct
attgataagcatgaagctgtgcagtttgacatgaactggaaagtgcctgctatcctttat
tacatcaaaaggaatcttaattccaaatacaatctgaacatcaagaaccccattgaggca
agtgtcctgctggctgaagcctctctagcacggaagcaacggaagacacataccaccttt
attcctttgatgctgaatgagatgccacagcttggggacctggtgggcctggatgctgag
tttgtcacccttaatgaggaggaagcagagttacgcagtgatggcacaaagtctaccatc
aaaccaagccagatgtcagtagcaaggatcacatgtgttcggggccagggacctaatgag
ggtattcccttcattgatgactacatctctacccaggagcaggtagtggattacttgact
cagtactcagggataaagccaggagatctcgatgccaagatctcctctaagcacctcacg
actctcaagtctacctacctaaagcttcgttttcttatagacattggagtcaagtttgtg
ggccatggtctgcagaaggacttccgggtcatcaacctcatggtacccaaggaccaagtc
cttgacacggtctatctgtttcacatgccccgaaaacgaatgatttccctacgattcctt
gcttggtactttctggacctgaagattcaaggggagacccatgacagtattgaggatgcc
cgcacagcccttcaactctaccgaaaatatctagaactcagcaaaaatggcactgaacct
gagtccttccacaaagtgctcaagggtctttatgagaagggccgaaagatggactggaag
gtgcctgagccagagggccagacaagtcccaagaatgcagctgtcttctcctcagtgctg
gcgctctga
DBGET
integrated database retrieval system
