Manis javanica (Malayan pangolin): 108402501
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Entry
108402501 CDS
T06054
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04140
Autophagy - animal
mjv04148
Efferocytosis
mjv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108402501 (VPS39)
04148 Efferocytosis
108402501 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108402501 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mjv04131
]
108402501 (VPS39)
Membrane trafficking [BR:
mjv04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
108402501 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
SAM_CEP-1_C
DUF4145
Lgl_C
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
108402501
NCBI-ProteinID:
XP_017524588
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRRDIGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGE
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTLEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKGLAIPYLEHIIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPEGKTPVPAGEEKGELGEYRQKLLMFLEIS
GYYDPARLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQSK
DGYKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKGVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccggtgccgatcctagaaaagctgcctctacagatcgactgc
ctggctgcttgggaggaatggcttcttgttggaaccaaacaaggacatcttcttctctac
aggattcgaagggacattggttgcaacaggtttgaagtgacactagagaagtccaataag
aacttctccaaaaagattcaacagatccatgtggtttcccagtttaagattctggtcagt
ttgttagaaaataacatttatgtccacgacctattgacatttcaacaaatcactacagtc
tcaaaggcaaagggagcttcgctgttcacatgtgacctccagcacacagagaccggtgag
gaggtgttgcgcatgtgtgtggctgtgaaaaagaagctgcagctgtatttctggaaggac
agggaatttcatgaattgcagggggactttagtgtaccagatgtgcccaagtccatggcc
tggtgtgaaaattctatctgtgtgggtttcaagagagactactacctaataagggtggat
ggaaaggggtccatcaaagagctctttccaacaggaaaacagctggagcccttagttgca
cctctggcagatggaaaagtggccgtgggtcaggatgatctcacggtggtactcaacgag
gaggggatctgcacacagaagtgtgccctgaactggacagacataccagtggccatggag
caccagcctccttacatcattgcagtgttgcctcgatacgtggagatccgaaccctggag
ccaaggcttctggtccagagcattgaattgcagaggccccgcttcattacctcaggagga
tcaaacattatctatgtggccagcaatcattttgtttggagactcattcctgtgcccatg
gcaacccaaatccaacagcttctccaggacaagcagtttgaattggctctgcagcttgca
gaaatgaaagatgattctgacagtgaaaagcagcagcagatccatcatatcaagaacttg
tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaag
cttggcacagatcctacccatgtgatgggcttgtacccggacttgctgcccacagactac
cggaagcagctgcaataccctaacccactgcccgtgctctccggagctgagctggagaag
gctcacttagctctgattgactacttgacacagaaacgaagtcaattggtaaagaagcta
aatgactctgatcaccagtctagcacctccccgctcatggaaggcactcccaccatcaaa
tccaagaagaaactgttgcaaatcattgacaccactctgctcaagtgctacctccatacg
aatgtggccctggtggcccccttgctgcgcctggagaacaatcactgccacatcgaagag
agcgagcacgtgctgaagaaggcccacaagtacagtgagctaataatcctgtatgagaag
aaggggctccacgagaaagctctgcaggtactggtggaccagtccaagaaagcaaactct
cctctgaagggccatgagcggacggtgcaatatctgcaacatctgggcacagaaaacctg
catttgattttttcctactcggtgtgggtgctgagagacttcccagaggatggcctgaag
atatttactgaagacctcccggaggtggagtctctgccgcgagaccgagtgcttggcttc
ttaatagagaattttaagggtctggctattccttatctggaacatatcatccacgtttgg
gaggagacaggctctcggttccacaactgcctaatccagctgtactgtgagaaggtgcaa
ggtctgatgaaggagtatctgctgtccttccctgaaggcaaaactccagtccctgctgga
gaggagaaaggtgagctgggagaataccgacagaagctccttatgttcttggagatttcc
ggctactatgatccagcccggctcatctgtgactttccttttgatggcctcttggaagaa
cgtgctctcctgctgggacgcatggggaaacatgagcaagctctcttcatctatgtccac
atcctgaaggatacaaggatggctgaggagtactgccacaagcattatgaccaaagcaaa
gatggctacaaagatgtgtatctgtccctgctccggatgtacctgtcacctcccagtgtt
cactgcctggggccaataaaactggaactgctggagccacaagccaatctccaggccgcc
ctgcaggtcctcgagctgcaccatagcaagctggataccaccaaggccatcaaccttctg
ccagcaaacactcaaattaatgacatacgcatctttctggaaaaagtcttggaagaaaat
gcacaaaagaaacggttcaatcaagtgctcaagaaccttctccatgcagaattcctgagg
gtccaggaagagcggattttacatcagcaggtgaagtgcatcatcacggaggagaaggtg
tgcatggtgtgtaagaagaagattgggaacagtgcatttgcaagataccccaatggcgtg
gtcgtgcactacttctgttccaaaggagtaaacccggctgacacctga
DBGET
integrated database retrieval system
