Manis javanica (Malayan pangolin): 108402608
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Entry
108402608 CDS
T06054
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108402608 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mjv01009
]
108402608 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mjv04515
]
108402608 (PCDH9)
Protein phosphatases and associated proteins [BR:
mjv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108402608 (PCDH9)
Cell adhesion molecules [BR:
mjv04515
]
Cadherins
Protocadherins
108402608 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
MAP17
RCR
Big_9
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
108402608
NCBI-ProteinID:
XP_036879445
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGASA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDSGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPEDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPGSAGFHIQENEESRYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS
NEGHFNNGSHMTDIPLANLKSYKQAGSAVESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattct
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
gggaacataccaaaggatctgaacatttctcacatcaatgctgccacgggggccagtgcc
agccttgtctacagactggtctctaaagctggggatgcccctttggtgaaagtatccagt
agcactggggaaattttcacaacctccaatcgaatagacagagaaaaactctgtgctgga
gcctcttatgctgaggagaatgagtgtttctttgaacttgaagtggtgatccttcccaat
gattttttcaggctgatcaaaataaaaataattgtcaaggataccaacgataatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaatcccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttgaatgggcagagtgtttttggactggatatcgtggaaactccggagggagaaaag
tggccacaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccgcagaaatccagcacagccatcctgcaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcat
attccagagaatgctcctgtaggcacttctgtgattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcccccgcaaccaaa
agactctttgctttaaacaatactactgggctgattacagttcagaggtccttagatcga
gaggagacagccattcacaaagtgacagtgctggctagcgatggcagctccactcctgct
cgagcaacagtcaccatcaatgtcactgatgtcaatgataaccctcctaacatagacctc
aggtacataataagccccatcaatggcacagtgtatttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaagacaccgatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtctacgacaaccagtatttg
ttagagacctcctctttgctggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gacgaaaatgacaacccacccattttcaaccagcctgtaattgagctgtcagtttcggaa
aacaaccggcgtgggttatacttaacaacgattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaagaacgattcattttt
acagtaactgccagggacagtgggacccctcccctccagagccaagcggctgtgatagtt
actgttctggatgagaatgacaatagccccaagtttacccataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtgatcacagtgacagacgcagat
gctggagagaataaagccgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcatttgatagagagcagcagagttcc
tacacgtttgatgtcaaagccaccgatggaggacaaccaccccggtcctctactgcaaaa
gtaactatcaatgtcatggatgtcaatgacaatagccccgtggtcatctctccaccttct
aacacttcttttaagttggtgcccctctcagccattcctggctctgtggtggcagaagtt
ttcgccgtggatattgacacggggatgaacgcagaactgaagtataccattgtgagtggg
aacaacaaaggcttgtttcggattgatccagtaacagggaacattactctggaagaaaaa
ccagcgcccactgatgtgggcttgcaccgtttggtggtcaacataagtgacctgggatac
cctaagtctttgcacacactggtgcttgtctttctctatgttaacgacactgctggaaac
gcctcctatatctatgacttgatccgcaggactatggagacaccgttggacaggaacata
ggggatagtagccagccctatcaaaacgaggactatctcaccatcatgatcgccatcgtg
gccggagccatggtggtgatcgtggtgatcttcgtcaccgttctggtgcgctgtcgccat
gcgtcaaggttcaaagccgcccagaggagcaagcaaggtgctgaatggatgtccccaaac
caggagaataaacaaaacaagaaaaagaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgttacgattgaagagtccaaacccgaggatgcagttcacgaacctatc
aatgggacgataagcctgccagctgagttggaggagcaaagtataggaagatttgactgg
ggcccggcacctccaacaaccttcaagcctaacagccctgacctggccaagcactacaaa
tctgcttctccacagccggctttccatcttaaaccagacacgccggtttccgtgaagaag
catcacgtgattcaggaactccctttggacaacacctttgtcgggggttgcgacaccctt
tccaaacgctcctccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccggctctgcgggtttccacattcaggagaat
gaagaaagccgttacgagtcgcagcgccgggttacgtttcacctccctgatggctcccag
gaaagctgcagtgacagtggtctaggagaccatgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctatgaccaggcctctccggac
aagaggactgaagcagatggcaattctgaccccaactctgatgggcctctgggcccccgg
ggattagctgaagctacagagatgtgcactcaagagtgcttggttctgggtcactctgat
aattgctggatgcctcctggcttgggtccgtatcaacaccctaaatctcctctctcaacc
tttgcaccccagaaagagtgggtcaagaaggacaagcttgtgaatgggcacaccctgacc
agagcctggaaagaagacagcaacaggaaccagttcaacgaccggaagcagtatggctct
aatgaaggccatttcaacaatggcagccacatgacagacattcctctggccaatctgaag
tcttataagcaagcaggaagtgctgttgagagtcctaaggagcaccaactctaa
DBGET
integrated database retrieval system
