Manis javanica (Malayan pangolin): 108403124
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Entry
108403124 CDS
T06054
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108403124 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108403124 (PATL1)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108403124 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
108403124 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
108403124
NCBI-ProteinID:
XP_073084434
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MLLKVASDGETIASLFWSLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGAGAVDDDWQE
AHERLAELEEKLPMTVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAV
QTRPVLQPQPVSLNSSIWDGSEVLRRIRGPLLAQEMPTMSVLEYALPQRPPQGPEDDRDL
SERALPRRSTSPVIGSPPVRAVPIGTPPKQVAVPSFNQQILCPKPVHVRPPMPPRYPAPY
GERMSPNQLCAVPNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGF
VGSPLAAMNPKLLQGRVGQMLPPTPGFRAFFSAPPPATPPPPQQPPSGPGPHLQNLRTQA
PMFRPDTTHLHPQHRRLLHQRQQQNRNQHRTLNGAGDRGSHRISHQDHLRKDPYANLMLQ
REKDWVSKIQMMQLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGEGPKKERTKLITPQVA
KLEHAYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIE
KTYSLLLDVEDYERRYLLSLEEERPALMNDRKHKICSMYDNLRGKLPGQERPSDDHFVQI
MCIRKGKRMVARILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHL
PSVTVTSLLQQLMNLPQSAAAPAPCSPHLTAVLQNKFGLSLLLVILSRGEDLQSSDPATE
SAQNNQWTEVMFMATRELLRIPQAALAKPISMPTNLVSLFSRYVDRQKLNLLETKLQLVQ
GIR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgaaagttgcctctgatggggagacaattgcatccttgttttggtctttggag
gattgtcctttggatgaagatgaagatgcatttcaaggtctgggagaggaagatgaagag
attgatcaattcaatgatgatacatttggagcaggtgcagttgatgatgattggcaggaa
gcacatgagcgcctggctgaattggaagagaagctaccgatgacagttaacgaacaaaca
ggcaatggagaaagggatgagatggacttgttgggtgaccacgaggaaaatcttgcagaa
aggctcagtaagatggtgattgaaaatgaattagaagatccagctatcatgagggcagtg
cagacaaggccagttttgcaaccccaaccagttagtctcaattccagcatctgggatgga
tctgaagttctcaggcgaatccgaggaccactgcttgctcaggaaatgccaaccatgtct
gtattagaatatgccttgcctcagaggcccccacagggccctgaagatgatcgggacctt
tctgaacgtgcattaccaaggcggtcaacttcacctgtcattgggagtcctcctgttcga
gcggtccctatcggcaccccacctaagcaggtggctgtacccagcttcaaccaacagatt
ctgtgtccgaagcctgtccatgttcggcccccaatgccaccgcgctatcctgctccctat
ggtgagaggatgtctccaaaccagctgtgcgctgtcccgaattcttcccttctgggtcac
cctttccctcctagtgttcctcctgttctcagccccctccagagagcacagcttcttgga
ggagcacagctgcagcctggacggatgtctcccagccagtttgcacgggtccctggattt
gttggtagtccgcttgctgccatgaatcccaagttgctgcaagggcgagttgggcagatg
cttcccccaacaccaggcttccgtgccttctttagtgctccaccccctgctacaccacca
cctcctcagcagcccccctctggcccaggacctcacctgcaaaacctaagaactcaggcc
cctatgtttagaccagacacaactcaccttcatccgcagcaccgtcgactcttgcatcag
agacagcaacagaatagaaatcagcatcggactctcaatggtgcaggagatagaggaagt
caccggataagtcatcaagatcatctccgaaaggatccatacgccaatctcatgttgcag
cgagaaaaggactgggtctctaaaatccagatgatgcagctgcaaagcactgatccctac
ctggatgatttttattaccagaattactttgaaaaactggagaaattgtcagctgctgaa
gaagtgcaaggtgaaggccctaagaaggaacgcaccaagctcattacacctcaggtggcc
aagctggagcatgcctataagccagtgcagtttgagggctctctgggaaagcttactgtc
tccagtgtgaataatccgcgaaaaatgattgatgctgttgtgacatctcggagtgaggat
gatgagacaaaagaaaaacaagttcgggacaagagacgaaaaacccttgtcataattgag
aaaacctatagtttactccttgatgtggaggattatgaaaggcgttatctcctaagtcta
gaagaagaacgacctgccctgatgaatgacagaaagcacaaaatctgtagcatgtatgac
aacttaagggggaaattgcctggacaagagaggccaagtgatgaccactttgtgcagatc
atgtgtatacgaaaagggaagagaatggttgcccgcattcttcccttcctctccacagag
caggcagctgacattctcatgacaacagccaggaatctccctttccttatcaagaaggat
gcgcaagatgaggtgctgccatgcttattgagtcccttctctctcctcctctatcacctt
ccatcagtgactgtcaccagccttctgcaacagctaatgaacctacctcagagcgcagct
gcaccagcaccctgcagtcctcacctcaccgctgtgctccagaacaagtttggcctgtca
ctactccttgtcatcctgagccgtggggaagacctacagagttcagaccctgctacagaa
tcggcgcaaaacaaccagtggacggaggtgatgttcatggcaacccgagagcttctgcgg
attccccaagcagccctggccaaaccaatctctatgcccacaaacctagtatccctcttt
tctcgctatgttgaccgacagaaactgaacttgctggaaacaaagctgcagctagttcag
gggatacgataa
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