Manis javanica (Malayan pangolin): 108403180
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Entry
108403180 CDS
T06054
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
108403180 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjv03000
]
108403180 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mjv03310
]
108403180 (RORB)
Transcription factors [BR:
mjv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108403180 (RORB)
Nuclear receptors [BR:
mjv03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
108403180 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108403180
NCBI-ProteinID:
XP_017525620
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQGGEAEALAR
VYSAGVSNGLGGLGGDAGGTYANGHVIDLPKSEGFYSVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKIYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCTTVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataagtcatccgggatc
cactacggagtcatcacatgcgaaggctgcaagggattctttaggaggagccagcagaac
aatgcctcttactcctgcccaaggcagaggaactgtttgattgacagaaccaacagaaac
cgttgccaacattgccgcctgcagaagtgtcttgccctaggaatgtccagagatgctgtg
aagttcgggcggatgtccaagaagcagagggacagcctgtacgcggaggtgcagaagcac
cagcagcggctgcaggagcagcgacagcagcagggcggggaggccgaggcactcgccagg
gtgtacagcgccggcgtcagcaacggcctcggcggcctgggcggcgacgccggcggcacc
tacgccaacgggcacgtcatcgacctgcccaagtccgagggtttctacagcgtggactcc
ggccagccgtccccggatcagtccgggctggacatgactggaatcaaacagataaagcaa
gaacctatctacgacctcacatccgtccccaacttgtttacctatagctctttcaacaac
gggcagttagcgccagggataacgatgactgaaattgatcgaattgcacagaacatcatt
aagtcccatttggagacatgtcagtacaccatggaggagctacaccagttggcgtggcag
acacacacctatgaagaaattaaaatttatcaaagcaagtccagggaagcgctatggcag
caatgtgccatccagatcactcatgccatccagtatgtggtggagtttgcaaagcggata
acaggcttcatggaactctgtcaaaatgatcaaattctacttctgaagtcaggttgcttg
gaagtggttttggtgagaatgtgccgtgccttcaatccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcaaatgttcaaggccttaggttctgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaggaggagattgct
ttgttctcatctgctgttctcatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttactttgcacttcaacatgtgattcagaagaatcac
ctcgatgatgagaccttggcaaagttaatagccaagataccaaccatcacggcagtttgt
aacttgcatggcgagaagctgcaggtatttaagcaatcacatccagacatagtgaataca
ctctttcctccattatacaaggagctctttaatcctgactgtaccactgtctgtaagtga
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