Manis javanica (Malayan pangolin): 108403587
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Entry
108403587 CDS
T06054
Symbol
LIG3
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108403587 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mjv03400
]
108403587 (LIG3)
Enzymes [BR:
mjv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
108403587 (LIG3)
DNA repair and recombination proteins [BR:
mjv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
108403587 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
108403587
NCBI-ProteinID:
XP_036864354
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MTLTFKTLFPPVLRALSRKEQHHWPGLRQLRQWSETDLLYGCCPLQRRKPALSFQDGSLR
PGATCLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPN
PFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLAELEGWEELEDNEKEQISQHIADLA
SKSGSTPKKKTAVQAKLTATGQVTSPVKGASFVTNTNPRKFSGFSAKPNNSGETHSSPIP
KASLSSSKCDPKYKDCLLCKFRKLCAMVAENPSYNTKTQIIQDFLRKGSAGDGFHSDVYL
TVKLLLPGFIKSVYNLNDKQIVRLFSRVFNCSPGDMAQDLEKGDVSEPIRVFFEQSKSFP
PAAKSLLTIQEVDEFLLQLSRLTREDEQQQALQDTASRCTNDLKCIIRLIKHDXKMNSGA
KHVLDALDPITYEAFKASCDLRDVMEWVLLNEQEVEKEPGQRXALSIQAVLMTPVQPMLA
EACKSMEYAVKECPHSMFSEIKYDGERVQVRKNGDHFSYFSRSLKPVLPHKVAHFKDYIP
QAFPGGYSMILDSEVLLIDNKIGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLM
DRPLCERRKLLHDNMVEIPNRIMFSEMKQVKRAADLAGMINRVIREGLEGLVLKDVKGTY
EPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCHDPSTQKWCTV
TKCSGGHDDATLARLQRELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAAVWEITG
AEFSKSEAHTADGISIRFPRCTRIRDDKDWKFATNLPQLKVPALRLHVSSAPLPSLGSVG
IWSVHMSSVFSFPPFH
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgactttgactttcaagaccctcttcccgccagtcctccgtgcgctcagccgaaaagag
caacatcattggcctggcctaagacaactccgccagtggtcagaaacagatctgctttat
gggtgctgccccctccagagaagaaagcctgctctgtcattccaggatggcagtctaaga
ccgggtgccacttgccttgttttcttgccagggtcgcatgttggactctgcagtggcccc
tgtgagatggctgaacaacggttctgtgtggactatgccaagcgtggcacagctggctgt
aaaaaatgcaaggaaaagattgtgaagggtgtctgccgaatcggcaaagtggtgcccaat
cccttctccgagtccgggggcgatatgaaagagtggtaccacattaaatgtatgtttgag
aaactagagcgggcccgggccaccacaaaaaaaattgaggacctcgcagagctggaaggc
tgggaagagctggaagataacgagaaggaacagataagccagcacattgcagatctggct
tctaagtcaggaagcacaccaaagaagaaaaccgctgtccaggctaagctgacagccact
ggccaggtgacatctccagtgaaaggtgcctcatttgtcaccaataccaatcctcggaaa
ttttctggcttttcagccaagcccaataactctggggaaactcactcaagccctatccct
aaggcaagtctgtcctcaagcaaatgtgaccccaagtacaaggattgtctcctgtgcaag
tttcggaagttgtgtgccatggttgctgaaaatcctagctacaatacaaagacccagatc
atccaggatttccttcggaaaggctcagcaggagatggtttccacagtgatgtgtactta
acagtgaagctgctgctaccaggttttattaagagtgtttacaacttgaatgataagcag
attgttaggcttttcagccgcgtttttaactgcagcccaggtgatatggcacaagaccta
gagaagggtgacgtgtcggagccaatccgagtcttctttgagcagagcaagtcttttccc
ccagctgccaagagcctccttaccatccaggaggtggatgaattcctcctgcagctctcc
agactcaccagggaggatgagcagcaacaggccctacaggacactgcctccaggtgcacc
aatgaccttaagtgcatcatcaggttgatcaaacacgatncaaagatgaactcaggtgca
aaacatgtgttagatgcccttgaccccataacctatgaagccttcaaagcctcgtgtgac
ctacgggacgtgatggagtgggtcctccttaatgagcaggaggtggagaaggagccaggc
cagagatgagctttgagcatccaggccgtgctgatgaccccagtgcagcccatgctggcc
gaggcctgcaagtccatggagtacgcagtgaaggaatgtcctcacagcatgttctctgag
atcaagtatgatggagagcgagttcaggtacgtaagaatggggaccacttcagctacttt
agccgcagtctcaagcctgtcctgcctcacaaggtggcccactttaaggactacatcccc
caggctttccctgggggctacagcatgatcttggactctgaggtgctcctgatcgacaac
aagataggcaaaccactgccctttgggactctgggagtgcacaagaaagctgccttccag
gatgctaatgtctgcctgtttgtttttgattgtatctacttcaatgatgtcagcttgatg
gacaggcctctgtgtgagcggcggaagcttcttcatgataatatggttgaaattcccaat
cggatcatgttctcagaaatgaagcaagtcaagagagctgccgacttggctggtatgata
aaccgggtgatccgagaggggttggaagggctggtgctgaaggatgtgaagggtacatac
gagcctgggaagcggcactggctaaaagtgaagaaagactatttgaacgaaggggccatg
gcggacacagctgacctggtggtccttggagccttttatggacaaggaagcaaaggcggc
atgatgtctatcttcctcatgggctgccatgacccgagcacccagaagtggtgcacagtc
accaagtgttcaggaggccatgatgatgcgacgcttgcccgcctgcagagagaactggac
atggtgaagatcagcaaggatcccagcaagatacccagctggctgaaaatcaataagatc
tactatcctgacttcatagtcccagacccaaagaaagctgccgtgtgggagatcacaggg
gctgaattctccaaatctgaggcgcacacagctgatgggatctccatccgattccctcgc
tgcacccgaatccgtgatgataaagactggaaatttgcaactaacctcccgcagcttaag
gtaccagctcttcggctgcatgtgtcttctgccccactacccagcctcggctctgtgggc
atctggtctgttcacatgtcctctgtcttctcctttcccccattccactga
DBGET
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