Manis javanica (Malayan pangolin): 108403740
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Entry
108403740 CDS
T06054
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03013
Nucleocytoplasmic transport
mjv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108403740 (CASC3)
03015 mRNA surveillance pathway
108403740 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108403740 (CASC3)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108403740 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
108403740
NCBI-ProteinID:
XP_036878563
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGESCSESAGGGGSGSLPPQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKEEKSDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAY
IPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYG
YDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWTGERPNKSHRHQGPGGILPPRTFINRNA
AGTGRMSAPRNYSRSGGFKEGRTGFRPVEAGGQRGGRSGETVKHETSYRSRRLEQTPVRD
ASPETDGQVLGSPEKEEEVSEVPAPTPDTVPPAPDRPIEKKSYSRVRRTRIKAGDAVKVA
EEMPPPPEGLTPAPSVPETPPPPPAKTGNWETPVDSTTSGLEQDVAQLNITEQNWSPGQP
SFLQPRELRGMPNHIHMGAGPPPQFNRIEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHIS
IMEGHYYDPLQFQGPIYTHGDTPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLYP
PPVSMSPGQPPPQQLLAPAYFSAPGVMNFGSPSYPYAPGALPPPPPPHLYPNTQAPSQVY
GGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggacaccgaggatgaagagtcgggtgct
tcgggctcagacagcggcggttcccctgcgcggggaggggagagctgcagcgagagcgct
ggaggcggcggcagcggctctctgcctccccagcgcggaggccgagctggcgccctccat
ctgcggcgggtggagagcgggggtgctaagagcgctgaggagtcggagtgtgagagtgaa
gatggcatcgagggcgatgctgttctctcggattacgaaagtgcagaagactcagaaggt
gaagaaggggaatacagtgaagaggaaaactccaaagtagagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagaagagaaggaagaaaagtctgataccaaaggcact
gtgactggagagaggcagagtggggatgggcaggagagcacagagcctgtggagaacaaa
gtgggtaagaagggtcctaagcatttggatgatgatgaagatcggaagaacccagcttac
ataccccggaaagggctcttctttgaacatgatcttcgagggcaaactcaagaggaagaa
gtcagacccaagggtcgtcagcgaaagctatggaaggatgaaggtcgctgggagcatgac
aagttccgggaagatgaacaggctcccaagtcccgacaggagctcattgctctttatggc
tatgatatccgctcagctcacaatcccgatgacatcaaacctcgaagaatccggaaaccc
agatttgggagtcctccacaaagagatccaaactggactggtgagcggccaaacaagtcc
catcgccaccagggtcctgggggcatcctaccaccaaggacatttatcaacaggaatgct
gcaggtactggccgcatgtctgctcccaggaattactctcgatctgggggcttcaaggaa
ggtcgtactggttttagacctgtggaggctggtgggcagcgtggtggccgatctggtgag
actgttaaacatgagactagttaccggtcacggcgcctggagcagactcctgtgagggat
gcatctccagaaacagatggtcaagtgcttggcagtcctgagaaagaagaggaggtttca
gaggtaccagctcctactcctgacactgtaccaccagcccctgacaggcctattgagaag
aaatcctattcccgggtaagaagaaccagaatcaaagctggcgatgcagtcaaggttgca
gaggagatgccccctccacctgaagggctgactccagcaccttcagtcccagaaactcct
cctcctccacctgctaagactgggaactgggagactccagtggattctactaccagtgga
cttgagcaggacgtggcacaactaaatataacagaacagaattggagtccagggcagcct
tccttcctgcaaccacgtgagcttcggggtatgcccaaccacatacacatgggagcagga
cctccacctcagtttaaccggatagaagaaatgggtgtccagggtgggcgagccaaacgc
tattcatctcagcggcaaagacctgtgccagagcctcctgcccctcctgtgcacatcagt
atcatggaaggacattattatgatccattgcagttccagggaccaatctatacccatggt
gacacccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcaccttccc
catccaggtttacatccccaccagacaccggcacctctgcccaatccgggcctctatcct
ccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctgcttac
ttttctgctccaggcgtcatgaactttggcagtccaagttacccatatgctccaggggca
ctgcctccccccccacctcctcatctatatcctaacacgcaggctccatcgcaggtatat
ggaggagttacctactataatcccgcccagcagcaggtacagccaaagccctccccaccc
cggaggactccccagccagtcaccatcaagcccccaccacctgaggttgtaagcaggggt
tccagttaa
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