Manis javanica (Malayan pangolin): 108403930
Help
Entry
108403930 CDS
T06054
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03015
mRNA surveillance pathway
mjv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108403930 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108403930 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108403930 (CPSF6)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108403930 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
108403930
NCBI-ProteinID:
XP_036872919
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVK
GTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPL
AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF
PPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP
YGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgtggaccacatagacatttacgcggatgtgggcgaagagttcaaccag
gaagctgaatatggtgggcatgatcaaatagatttgtatgatgatgtcatctctccatct
gcaaataatggagatgccccagaagaccgggattatatggatactctgccaccaactgtt
ggtgatgatgtggggaaaggagcagcaccaaatgtagtctatacatatactggaaagaga
attgcattatatattggaaatctaacatggtggacaacagatgaagacttaactgaagca
gttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgggcaaat
ggccagtcaaaggggtttgcccttgttggtgttggatctgaagcatcctcaaaaaagttg
atggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggtcctccaggaggcagttcacgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgtcccaggtggggacagatttcctggacca
gcaggaccaggagggccacccccaccttttccaggaaatttgatcaagcatcttgttaaa
ggaactcggcctttgttcctggaaactaggattccatggcatatggggcacagcatagag
gaaatacccatttttggcctaaaagctggacagactccaccacgtccacccttaggtcct
ccaggcccacctggtccaccaggtcctccacctcctggtcaggttctgcctcctccttta
gctgggcctcctaatcgaggagatcgccctccaccaccagttcttttccctggacaacct
tttgggcaacctccattgggtccgcttcctcctggccctccacctccagttccaggctac
ggcccacctcctggtccaccacctccacaacagggaccacctccacctccaggccccttt
ccacctcgcccaccgggccctcttgggccaccccttacacttgctcctcctccgcatctt
cctggaccacctccaggtgccccaccaccagctccacatgtgaacccggctttctttcct
ccaccaactaacagcggcatgcctacatcagatagccggggtccaccaccaacagatccc
tatggccgacctccaccatatgataggggtgactatgggccacctggaagggaaatggat
actgcaagaacaccattgagtgaagctgagtttgaagaaatcatgaatagaaatagggca
atctcaagcagtgctatttcaagagctgtgtctgatgcaagcgctggtgattatgggagt
gctattgagacattggtaactgcaatttctttaattaaacagtccaaagtatctgctgat
gatcgttgcaaagttcttattagctctttgcaagattgccttcatggaattgaatccaag
tcttatggttctggatcaagaagacgtgaacgatcaagagagagggaccatagtagatca
cgagaaaagagtcggcgtcataaatcccgtagtagagatcgtcatgatgattattataga
gagagaagcagagaacgagagagacatcgggaccgggaccgggaccgagaccgagaacgt
gaccgagagcgcgagtatcgtcatcgttag
DBGET
integrated database retrieval system
