Manis javanica (Malayan pangolin): 108404036
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Entry
108404036 CDS
T06054
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04613
Neutrophil extracellular trap formation
mjv05014
Amyotrophic lateral sclerosis
mjv05034
Alcoholism
mjv05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
108404036 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
108404036 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108404036 (HDAC6)
09165 Substance dependence
05034 Alcoholism
108404036 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mjv01009
]
108404036 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108404036 (HDAC6)
04131 Membrane trafficking [BR:
mjv04131
]
108404036 (HDAC6)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108404036 (HDAC6)
Enzymes [BR:
mjv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108404036 (HDAC6)
Protein phosphatases and associated proteins [BR:
mjv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108404036 (HDAC6)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108404036 (HDAC6)
Membrane trafficking [BR:
mjv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108404036 (HDAC6)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108404036 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
108404036
NCBI-ProteinID:
XP_017526938
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MTSTGQDSSTARQRRNRHNPRSPPRNSGITSKRGVKKGAGARTSPSLADVKKKGRMKKLS
QAAEQDLIIGLQGLDPNLEAKTLSGTGLVFDEQLNEFHCLWDDSIPEGPERLHAIRKQLI
QEGLLDRCISFQARFAEKEELMFVHSLEYIDLMETTQYMNEEELHILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAIAARYAQQ
KHDIQRVLIVDWDIHHGQGTQFTFDKDPSVLYFSIHRCEEGRFWPHLRASNWSTTGFGQG
QGYTVNVPWSQVGMQDADYIAAFLHILLPIALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCPSA
QASFCCTLEALEPFWEVLVRSAEALEEDNMEGDNMEEEEEEEEGPWQPPEFPVLTWPMLQ
ARTGLVYDQQMMSHYNLWDSHHPEMPQRVSRIMRRLEELGLAGRCLTLRPRPATDAELLT
CHSSEYVGRLRATEKMKTRELHRESTNFDSIYICPSTFACAQLATGAVCRLVEAVLAGEI
LNGAAVVRPPGHHAERDAACGFCFFNSVAVAARCAQAISGRALRILIVDWDVHHGNGTQH
IFEEDPSVLYISLHRYDHGTFFPMGDEGACSQMGRAAGTGFTVNVAWNGPHMGDTDYLSA
WHRLVLPIAYEFNPELVLVSAGFDAAQGDPLGGCNVSPEGYAHLTHLLMGLASGRIILIL
EGGYNLTSISESMAACVRSLLGDPPPLLTLPRPPLLGAMASITKTIQVHRRYWRSLRVTK
AEDRERPYSSKSVTKKAPQTANSGSAKGMTPPEENILDVGTGKATSASCVEESTPGQTKS
ETTVLEHTQNQPLETATGEATLDQTASEAAMGVAILDQTTSEAATGGATLDQATSEEAVV
GAKLIRIPPASYTDNQTPPSSSVQGATPQISLDKLIGNLRTLEVDNEPQEAPEEDRLLGE
AVGGQDMDESVLMQSSGDHVYAYQTMFYAVTPLPWCPDLVAVCPIPEAGLDVTQPCQDCG
VLQENWVCLSCYQVYCGRYINAHMVRHHEGSGHPLVLSYADLSAWCYNCQAYIHHQTLVD
AKNIAHQNKFGQLMPQSH
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggtcaggattcctccacagccaggcagcgaagaaacaggcataaccca
cgctcacccccccgcaactccggcatcacctcgaagcgaggtgtcaagaagggtgctgga
gcccgcaccagccccagtctagctgatgtgaaaaagaaaggcagaatgaaaaagctcagc
caagcagccgaacaagacctaatcatcgggttacaagggctggatccgaaccttgaggcc
aagacactgtctggcacgggcttggtgtttgatgagcagctaaatgaattccactgcctc
tgggatgacagcatcccagaaggccctgagcggctccatgccatcagaaagcagctgatt
caggagggcctcttggaccgttgcatatcctttcaggcccggttcgccgaaaaggaagag
ctgatgtttgtacatagtctagaatacattgatctgatggagacaacccagtacatgaat
gaggaggagctccacatcctagcagacacctacgactcagtttatctgcatccgaactca
tacacctgtgcctgcctggcctcaggctctgtccttcggctggtggatgcagtcctaggg
gccgagatccgaaatggcatggccattatcaggcctcctggacaccatgctcaacacagt
ctaatggatggatattgcatgttcaaccacgtggccatagctgcccgctatgctcaacag
aagcatgacattcagagggtactcattgtggattgggatatacaccatggtcaagggaca
cagtttacctttgacaaggaccccagcgttctctatttttccatccaccgctgtgaggag
ggtcggttctggccccatcttagggcctctaactggtccaccacaggttttggccagggc
caaggatatactgtcaatgtgccttggagtcaggtggggatgcaagatgctgactacatt
gcggctttcctgcacattctgctgccgatcgcccttgagttccagccccagctggtcctg
gtggctgctggatttgatgccctccaaggggaccccaagggtgagatggctgccactcca
gcagggttcgctcagctaacccacctgctcatgggtctggcaggaggcaagctgatcctc
tctctggagggtggctacaacctccgctccctggctgagggtgtcagtgcctcactccac
acccttctgggagacccttgccccatgctggagtcccctggtgctccttgcccaagtgcc
caggcatcattctgttgcactctggaagccctggagcccttctgggaggtccttgtaaga
tcagctgaagccctggaggaggataatatggaaggggacaacatggaggaagaggaggag
gaggaggagggaccatggcagccccctgaattcccagtcctgacatggccaatgctgcag
gctcgcacagggctggtctatgaccaacagatgatgagtcactacaatttatgggacagc
caccacccggagatgcctcagcgggtctcacgcatcatgcgacgcttggaggagctgggc
cttgctgggcgctgcctcacccttcgtccacgtcctgctactgatgctgagctgctcacc
tgccacagttctgagtatgtgggtcgcctacgggccacagagaagatgaaaaccagggag
ctgcatcgtgaaagcaccaactttgactccatctacatctgccccagcactttcgcctgt
gcacagctggccacaggcgccgtgtgccgcctggtggaggctgtgctggcaggagagatt
ttgaatggtgctgcagtggtgcgcccccctggacaccatgctgagcgggatgccgcttgt
ggtttctgctttttcaactctgtggctgtggctgctcgctgtgcccaggccatcagtggg
cgagctctacggatcctaatcgtggactgggacgtccaccatggtaatggaactcaacac
atatttgaggaggatcccagtgtgctatacatttccctgcaccgctatgatcacggcacc
ttctttcccatgggggatgagggtgcctgcagccaaatgggcagggctgcaggcacaggc
ttcactgtcaacgtggcctggaatgggccccacatgggtgacaccgactacttgtctgcc
tggcatcgtctggtgcttcccattgcctatgagtttaatccagaactggtactggtctca
gctggctttgatgctgcacaaggggacccgctcgggggctgtaatgtgtcacctgagggc
tatgcccacctcacccacctgctgatgggccttgccagtggccgcattatccttatccta
gagggtggctataacctgacatccatctcggagtccatggctgcctgtgtccgctccctc
cttggggacccaccacccctgctgactctgccacggcccccacttttgggggccatggct
tcaattaccaagaccattcaagttcatcgcagatactggcgcagcttgcgggtcacaaag
gccgaagatagggagagaccatacagttctaagtcagtcaccaagaaggcaccccaaaca
gcgaattctgggtcagccaaggggatgaccccaccagaagagaatattctggatgtaggc
acaggaaaggccacctcagcatcatgtgtggaagagtccactccaggccagacaaagtca
gagaccactgtgttggagcatacgcagaaccagcccttggagacagccacaggggaagct
acattggaccagaccgcctcagaggcagccatgggagttgctatactggaccagaccacc
tcagaggcagctacagggggagccacactggaccaggccacctcagaggaggctgtggtt
ggagccaagctaatccgaatccctccagcttcatacactgacaaccagactcccccatcc
tcatctgtgcaaggagccacaccccaaatctctctcgataagctgattgggaatctcagg
accttggaagtagacaatgagcctcaggaagcaccagaagaagataggctactaggagag
gcagttggaggtcaggacatggatgagtcagtgctgatgcagagctctggggaccatgtt
tatgcttaccagaccatgttttatgctgtgactccacttccctggtgtcccgatttggtg
gcagtatgccccatacctgaagccggcctggatgtgacccaaccttgtcaagactgtgga
gtactccaggagaactgggtgtgtctgtcttgctatcaggtctactgtggtcgttacatc
aatgcccacatggtgcggcaccacgaaggctcaggacacccactggtcctcagctatgct
gacctgtctgcctggtgttacaactgtcaggcttatatacaccaccagactctcgtagat
gcgaagaacatcgcccaccagaacaagtttgggcagctcatgccccagtcacactaa
DBGET
integrated database retrieval system
