Manis javanica (Malayan pangolin): 108404621
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Entry
108404621 CDS
T06054
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mjv01002
]
108404621 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mjv04121
]
108404621 (USP42)
Enzymes [BR:
mjv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108404621 (USP42)
Peptidases and inhibitors [BR:
mjv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108404621 (USP42)
Ubiquitin system [BR:
mjv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108404621 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108404621
NCBI-ProteinID:
XP_017527786
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MTVIDKTSESSDPSTYQDHQPGSSESVSPGDMDTGSASWGAGAVASLNDVSNHTLSLGPV
PGAVVYSSSSIPDKSKPSPQKDQALGDGITPPQKVLFPSEKICLKWQQIHRVGAGLQNLG
NTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPGDVIKPM
FVINEMRRIARHFRFGSQEDAHEFLQYTVDAMHKACLNGSNILDRPTQATTLVCQIFGGY
LRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKLEQLDGNNSYKCSKCKKM
VPASKRLTIHRSSNVLTLSLKRFANFTGGKITKDVKYPEYLDVRPYMSQSNGEPIIYVLY
AVLVHSGFNCHAGHYFCYIKASNGLWYQMNDSTVSTSDIRSVLNQQAYVLFYIRSHDVKN
GGELTRSTQCLGKASPRPAISQRVVNNKQAASGFIGPQLPSHVMKNPPHLNGTGPLKETP
SSSISSSNGNSSVNRAGPVNASTSVQNWAVNRSSVLPEHPKKQKITISIHNKLPVRQAQT
QPNLHVNALENPNKPVPSATITSPSAIQSTSSASATSVSSKVTKQVTLSESCSKPVMNGK
SKLNPGVLVPYGAESSEESDEEARGLGKENGVGAVDSLPASLQDASENEATQHELQETVT
LNGANSTDSDLKETGLPFDGASCQVQPALHLGNPFSKANGLPGKLMPAPLPPLPEDKILE
NFKLGNKVKVLTEETSAPGTEGSAPEGPEAAPEAGGPAPGSQEGLDAITSLSSKLKKALA
PSDPSIKSTKEEVSENISAKPEESLPSISSLCSTNKSAVGGDQLSKLCESANLTNDQSPP
ATAVTGMLMESPQGLAAVETGGNLSPRSPARAKGDCEHELVVYISQDTSVDVEALPEGVG
APPAELPAPQLDKITESHLEAGREQSPSEGWEEIKAGQKVRDRSPVKEKISLRKVDRGHY
RNRRDHCSNEERAWDGRSKTKDRQPRKQPLSVRGHSRSPVRSGHHHSRNRNRSDQDWSRY
HHLESEHSWGQEKYYPEKMQWDRGQRSHGRYTPNVARELRDWKSFHGYQEYDRGRPCSGR
PNKDYHKGRKGYELVAKEKGQHHSSSPRAGLPPALLFLEQCTHKLAPMAEDSGCDLAHRV
PEHESMRSRKRKCSAENNDDHWGRLQEDPSEGPRVKKHKKSKKKKRSKDKHRDRGSRHPQ
DSDPSAMCSDADLHRHKKKKKKKKRHSRRSEDLVKDSQSPFPKATSFETGAHFRRAGSDF
SLTSGLPLEGVGRFHEKTKHLRMESRDDRCRVSDCVQGENLAAKHKIHYL
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaattgacaaaacttctgaatcttcagacccatcaacctatcaggatcatcag
cctggcagttctgagtccgtctcacctggagacatggatacaggttctgctagctggggt
gctggtgctgttgcttcattaaatgatgtttcaaatcacacactttctttaggaccagta
cctggtgctgtggtttattcaagttcatctatacctgataaatcaaaaccatcacctcag
aaggatcaagctctaggtgatggcattactcctccacaaaaagttcttttcccatctgag
aagatttgtcttaagtggcaacaaattcacagagttggagccgggctccagaatctgggc
aatacctgttttgccaatgcagcactgcagtgtttaacgtacacgccacctctcgccaat
tacatgctctcacatgaacactccaagacatgtcatgcagaaggattttgtatgatgtgt
acaatgcaaacacatatcacccaggcactcagcaatcctggggatgttattaaaccgatg
tttgtcattaatgagatgcgacgcatagctaggcacttccgctttggaagccaagaggat
gcccacgagttccttcagtacactgttgatgccatgcacaaggcctgcttgaacggcagc
aatatattagacagacctacccaggctaccacgctcgtttgtcagatatttggagggtac
ctaagatctagagtcaaatgtttaaattgcaaaggtgtttctgatacgtttgatccatat
cttgatataacattagagataaaggctgctcagagtgttaccaaggctttggagcagttt
gtgaagctggagcagcttgatggaaacaactcatacaagtgcagcaagtgtaaaaagatg
gttccagcttcaaagaggcttactattcatagatcctctaatgttcttacactttctctg
aaacgttttgcaaattttactggtggaaaaattaccaaggatgtgaaatatcctgagtat
cttgatgttagaccatacatgtctcaatcaaatggagaaccaattatttacgttttgtat
gcagtactggtacacagtggttttaattgccatgctggccattacttctgctacattaaa
gctagcaatggcctttggtatcaaatgaatgactccactgtatctaccagtgatattaga
tcggtactgaatcaacaagcttatgtcctcttttatatcaggtcccacgatgtgaagaat
gggggtgaacttactcgttccacccagtgcctcggcaaggcctccccccgcccagccatc
agtcagcgagtggtcaacaacaagcaggctgcatcagggtttatcggaccacagcttccg
tcacatgtgatgaagaacccacctcacttaaatgggaccggaccattgaaagaaacgcca
agcagctccatatcgagttctaatggaaactccagtgttaacagggctggtcctgttaat
gcttcaacttctgttcaaaactgggcagtgaacaggtcctcagttcttccagaacatccc
aagaaacaaaaaatcacgatcagtattcacaacaagttacctgttcgccaagctcagact
cagcctaacctacatgtcaatgctttagagaacccgaacaagccagttccctctgctacc
atcaccagtccttctgcgatacagtctacctcgagtgcatctgcaacgtcagtttctagt
aaagtaacaaagcaggttaccctgagcgagtcctgttccaagccagtgatgaacggcaag
tccaagctgaacccaggagtcctggtcccttatggtgccgagtcatcggaagagtctgac
gaggaggcaaggggcctaggcaaggagaacggtgtaggcgccgttgatagcttgcctgct
tctcttcaggacgccagcgagaacgaggccactcagcacgagctccaagaaactgttact
ctaaatggtgctaacagtacagacagtgacctgaaagaaactggtctgccgtttgatggg
gccagttgccaggtccagcctgctctgcacttaggaaatcccttctccaaggcaaatggt
ctgcctgggaagctgatgcctgcccctttgccgccactcccagaggacaaaatcttagag
aacttcaagcttggcaacaaagtgaaagtcttgacagaggaaacaagtgcacctgggacc
gagggaagcgccccggagggtcctgaagcagcacctgaggctggcggccctgcccctggg
tcccaggagggactggatgccatcacgagccttagtagcaaactgaaaaaggctttggca
ccctcagaccccagcattaaatctaccaaagaagaagtttctgaaaatatttcagcaaaa
cctgaagagtctttgcccagtatcagcagtctttgcagcaccaacaagagtgctgtgggg
ggcgaccaactttctaaactgtgtgagtctgcgaatctaacaaacgatcagagcccacca
gccacagccgtgacagggatgttaatggagagtccacagggcttggcagcagtggaaacg
ggagggaatttgagtccaaggtccccagcacgagccaagggtgactgtgagcacgagctc
gtagtctacattagccaagacacgtccgtggatgtggaggcccttcctgagggtgtgggt
gcacctccagctgagctgcctgctcctcagttggacaagatcacagaaagtcatctggaa
gcaggccgtgaacagagtcccagcgaaggatgggaagaaattaaggctgggcagaaagtt
cgggaccgctctccagttaaggagaaaatcagtctcagaaaggttgaccgagggcattac
cgcaaccgaagagaccactgctccaatgaggagcgggcctgggacggccggagcaagacc
aaggaccgccagccccggaagcagcccttgtccgtgagggggcacagcaggtccccggtg
agatccggccaccaccactctcgaaaccggaacaggtcagaccaggactggagccgatac
caccacttggaaagcgagcactcctggggccaggagaagtattacccagagaagatgcag
tgggatagaggccagcgctcccatggcaggtacacccccaatgtggcacgggagctgcgg
gactggaagtccttccatgggtaccaagagtatgacagaggcaggccatgcagtggccga
ccaaacaaggactatcacaaaggcaggaaggggtatgagctggttgccaaagagaagggc
cagcaccattccagcagcccccgagcaggcctgccgcctgccctcctgttcctcgagcaa
tgcacccacaagctggcacctatggctgaggacagcggctgcgacctcgcccatcgggtt
cctgagcacgaaagcatgcggtcacggaaacggaaatgtagtgcagagaataatgatgac
cactggggccgcctgcaggaggacccttcagaagggcctcgagtaaagaagcataagaag
tcaaagaagaagaagagatccaaagacaaacaccgggaccgaggttccaggcacccacag
gactcagacccctcagcaatgtgctctgatgccgacctccacaggcacaaaaagaaaaag
aagaaaaagaagagacactcgaggagatcagaggaccttgtgaaagattcacagtcgccc
ttccccaaggccaccagcttcgagactggggcccacttccggagagctgggagcgacttc
tctctcaccagtggcctacctctggaaggtgttggacgtttccatgagaaaaccaaacat
ttgaggatggaaagcagggatgacaggtgccgtgtgtctgactgtgtccagggtgaaaac
ttggccgcaaaacacaaaattcactacttatga
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integrated database retrieval system
