KEGG   Manis javanica (Malayan pangolin): 108404921
Entry
108404921         CDS       T06054                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03013  Nucleocytoplasmic transport
mjv04150  mTOR signaling pathway
mjv05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108404921 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    108404921 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    108404921 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mjv03019]
    108404921 (SEH1L)
   04131 Membrane trafficking [BR:mjv04131]
    108404921 (SEH1L)
Messenger RNA biogenesis [BR:mjv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108404921 (SEH1L)
Membrane trafficking [BR:mjv04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    108404921 (SEH1L)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EIPR1 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_IFT122_1st Mito_fiss_reg
Other DBs
NCBI-GeneID: 108404921
NCBI-ProteinID: XP_017528236
LinkDB
Position
Unknown
AA seq 429 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDSSPNATAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAI
ATKDVRIFTLKPVRKELTSSSGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVSGSSQQGNSNPSLGSSTPNLQNSLNGSSASRYFF
PPRDSPRAGSRWSSYAQLLHSPPPPPPPPPPPPLVEHSCDADTANLQYPHPRRRSFSRPL
NPLPENEGV
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgtttgtcgcgcgtagcatcgcggcggaccataaggatcttatccatgatgtctctttc
gacttccacgggcgacggatggcgacctgctctagcgaccagagcgtcaaggtctgggat
aaaagtgaaagtggggattggcattgtactgctagctggaagacacatagtggatctgtg
tggcgtgtgacatgggcccatcctgaatttggacaggttttggcttcctgttcttttgac
cgaacagctgctgtatgggaagaaatagtaggagaatcaaatgataaacttcgaggacag
agtcattgggttaagaggacaactctagtggatagcagaacatccgttactgatgtgaaa
tttgctcctaagcatatgggtcttatgttagcaacctgttcagcagatggtatagtaaga
atatatgaggcaccagatgtcatgaatctcagccagtggtctctgcagcatgagatctca
tgtaagctaagctgtagttgcatttcttggaacccatcaagttcccgtgctcattctccc
atgatagcagtaggaagtgatgacagtagtccaaatgcaacagccaaggtacagattttc
gaatataatgaaaacaccaggaaatatgcaaaagctgagaccctcatgacagtcacagat
cctgtccatgacattgcatttgctccaaacttgggacggtcctttcatattctagccata
gcaaccaaagatgtgaggatttttacgttaaagcctgtgaggaaagaacttacttcctct
agtgggccaacaaaatttgaaatccatatagtggctcagtttgataaccataactctcag
gtctggcgagtgagttggaatataacaggaacagtgctagcatcttcaggagatgatggc
tgtgtaagattgtggaaagctaattatatggacaattggaagtgtactggtattttgaaa
ggtaatggaagtcctgtgagtgggagttctcagcagggaaactcaaatccttccctaggt
tcaagtaccccaaatcttcaaaattcattaaatggatcttctgctagcaggtatttcttt
ccccctcgggattccccacgggctggatcaagatggtccagttatgcccagctccttcat
tctcctcctcctcctcctcctcctcctcctcctcctcctctggtagaacactcttgcgat
gctgacactgccaacctccagtatcctcaccctcgcagacgatctttctctcggcctctt
aaccccttacctgagaatgaaggggtttaa

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