Manis javanica (Malayan pangolin): 108405049
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Entry
108405049 CDS
T06054
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X3
KO
K16617
collagen type XIII alpha
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
108405049 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mjv00536
]
108405049 (COL13A1)
Glycosaminoglycan binding proteins [BR:
mjv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108405049 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
108405049
NCBI-ProteinID:
XP_017528449
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MVAERARKAAAASACGPGELGAPGTVALAVAPAERCARLPSPGSCGLLALALCSLALSLL
AHFRTSELQARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHIRRRRETPKTSPGCHCP
PGPPGPVGRPGLPGDKGAIGMPGRVGVKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGHPGPKGEMGLIGPRGQLGPQGQKGEKGQCGEYPHRLLPLLNSVRLAP
PPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGI
QGYHGRKGERGMPGTPGKHGAKGAPGITVAGLKGEPGTPGAKGEKGAAGSPGLLGLLGQK
GEKGDTGNSIGGSRGEPGPPGLPGPPGPKGEAGVGGPGGSPGQQGDKGEPGAAGGQGPAG
PKGSKGEPGKGEMVDYNGNISEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLP
GPPGLDGEKGPRGKPGDVGPPGPQGPPGKMGPAGMKGEDGHMGSPGEKGEKGEAGQAGPP
GLDGPTGEKGEPGGQGRPGMTGLPGPIGLPGFTGEKGEPGKKGDPGVEVPGPPGPEGPPG
PPGLQGVPGPKGEAGLDGPKGEKGVQGEKGDRGPLGLPGTPGPTGVPGPAGPKGERGSKG
DPGVTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGL
PVQGCWNK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagcgcgcccgcaaagcggcggcggccagtgcctgtggccctggagagctg
ggcgcgcccgggaccgtggcgctggcagtggcgccggcggagcgctgcgctcggctgccg
agcccggggtcgtgcgggctgctggccctggccctctgctcgctggcactcagcctgctc
gcccactttcggacgtctgagctgcaggcccgggtgctgcgcctggaagccgagcgcggg
gagcagcagatggagacggctattttgggacgagtcaaccaactgctggatgagaaatgg
aagctccacattcggaggcgccgggagaccccaaagacctctccagggtgccactgccca
cctggacctcctggtcctgttggaagacctggactcccaggagacaaaggtgccattggg
atgcctggacgtgtgggagtaaagggccaaccaggcgagaagggggctccaggagatgcc
gggatgtccatcatcggtcctcgcggcccccctggtcagccaggcactcgaggttttcct
ggatttccgggtcccattgggctagatggcaaaccgggccaccctggaccaaaaggggag
atgggcctgataggtcctcgaggacagctgggacctcaaggacaaaaaggagaaaagggt
cagtgtggagagtacccacaccggctgctgcctctcctcaattcagtgcgactggctcca
cccccagtcataaaaaggcggaccttccagggtgaacagggccaagctggcatccaaggc
ccaccagggccaccaggcccccctggaccaagtggacctctgggacacccaggactgcca
gggcccatggggccacctggcttacctgggcctcctggaccaaagggagaccctgggatt
cagggctaccatggacgaaagggagaacggggcatgccagggacgccgggcaaacacgga
gcaaagggggctcctgggatcaccgtggctgggctgaagggtgagccagggacccccgga
gccaagggtgaaaagggggctgcaggctcccctgggctactcggcctcctgggacagaag
ggagagaaaggagacactggcaactccattggaggaagcagaggggagcccggcccccca
gggctccctgggcctccagggccaaagggagaagctggtgtaggtggccctggtggctcc
ccgggacagcaaggagacaagggggagcctggagcagctggaggacagggaccagctggc
cccaagggctccaagggagaaccagggaaaggtgagatggtggattacaatggaaacatc
agtgaggctctccaggagatccggacgctggccttgatggggccacctggtcttcctggc
caaatcggcccacctggagctccagggatcccaggtcaaaagggggagattggactgcca
ggccctccaggactcgatggggaaaagggacctcgaggcaaaccaggagacgtgggccct
cctggtccccaaggccccccaggaaagatggggcctgcaggaatgaagggagaagacgga
cacatggggagcccaggagagaagggagagaaaggcgaggcagggcaggcaggcccgccg
ggtttagacggtccaactggggagaaaggagaaccaggtggccaagggagaccaggaatg
acaggattgcctggccccatcgggctcccaggatttacaggagagaaaggagaacctggc
aagaagggtgacccaggagtggaggttcctgggccaccaggaccagaggggcctcctgga
cctccagggctccaaggcgttcctggaccaaagggggaagcaggactagatggaccgaaa
ggagagaagggtgtccagggagagaagggagaccgaggccctctgggattacccggcact
ccgggaccaactggagttccaggcccggcgggacccaagggcgagaggggcagcaaaggt
gaccctggggtgacaggaccaacgggagcagctgggcttcctggtttacacggaccaccc
ggggacaaaggaaaccggggggagagggggaagaaaggctctagagggcctaaaggggat
aagggagaccaaggagcgcctggattagatgccccctgtccattgggcgaagacggctta
ccagtccagggctgctggaacaagtga
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