Manis javanica (Malayan pangolin): 108405275
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Entry
108405275 CDS
T06054
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6 isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108405275 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108405275 (DDX6)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108405275 (DDX6)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108405275 (DDX6)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108405275 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
108405275 (DDX6)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108405275 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
108405275
NCBI-ProteinID:
XP_036848716
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctgtccagtcaaaatggtcag
ctgaggggccctgtgaagcccagtggcggccctggaggagggggcacacagacacagcaa
cagatgaaccagctgaaaaacaccaacacaatcaataatggcactcagcagcaagcacag
agtatgaccaccactattaaacctggtgatgactggaaaaagactttaaaactccctcca
aaggatctaagaatcaaaacttcggatgtgacttccacaaaaggaaatgagtttgaagat
tactgtttgaaacgggagttactgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggaggaaagcattcccattgctttgtctggtagggatattttagctagagca
aaaaatggaacaggcaagagcggtgcctacctcattcccttacttgaacggctagacctg
aagaaggacaatatacaagcaatggtgattgttcccactagagaacttgctctacaggtc
agtcaaatttgtatccaggtcagcaaacacatgggaggggccaaagtgatggcaaccaca
ggaggaaccaatttacgggatgatattatgaggcttgatgacacagtgcacgtggtaata
gctacccctgggagaatcctggatcttatcaagaaaggagtagcaaaagttgatcatgtc
cagatgatagtattggatgaggcagataagttgctgtcacaggattttgtgcagataatg
gaggatattattctcacgctacctaaaaacagacagattttattatattctgctactttc
cctcttagtgtacagaagttcatgaattcccacttgcagaaaccctatgagattaacctg
atggaggaactaactttgaagggagtaacccagtactacgcatatgtaactgagcgccaa
aaagtacactgcctcaacacacttttctccaggcttcagataaaccagtcgatcattttc
tgtaactcctctcagcgagttgaattgctagccaagaagatttctcaactgggttattct
tgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtatttcatgatttt
cgaaatggcttatgccgcaatcttgtttgcactgatttgtttacccgaggtattgatata
caagctgtgaatgtggtaataaactttgacttcccaaagctggcagagacctatctccat
cgtattggaagatcaggtcgctttggtcatcttggcttagccatcaacttgatcacatat
gatgatcgcttcaacctgaaaagtattgaggagcagctgggaacagaaattaagcctatt
ccaagcaacattgacaagagcctgtatgtggcagaataccacagcgagcctgtagaagat
gagaaaccctaa
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