Manis javanica (Malayan pangolin): 108405468
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Entry
108405468 CDS
T06054
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjv03000
]
108405468 (RC3H1)
04121 Ubiquitin system [BR:
mjv04121
]
108405468 (RC3H1)
Transcription factors [BR:
mjv03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
108405468 (RC3H1)
Ubiquitin system [BR:
mjv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108405468 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
108405468
NCBI-ProteinID:
XP_017529160
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSATILPEE
GAVDLPSRKPPALPNGIVSAGNTVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDML
ESVPKSISALPVNPHPVPPRGPADLPPMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA
PPFDPAPYQQGVYYTPPPQCVSRFVRPPPSAAEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPAQSYAREEIFRESPIPIEIPPAAVPSYVPEARERYQQMEGYYP
VAPHPTQIRPSYIREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHQEEFLDEDLKVTGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMREQRLDLHRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA
PQGAPTKSINISDYGPYGTHGGWGGSPYSPHQNIASQGHFSERERISMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGVEAVSNRLVLQREANALAGQSQPTPPPPKWPGMIS
SEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQSKVPAEDLTL
TFSDVPNGSNLTQENISLLSNKTSSLTLSEDPEGGEDNSDSQRSGVKSSCAP
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgtactcagact
tttgacgaaacaattcgaaagccaatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctccttcctgtgaactcagcattgctgcagctagtgggtgctcaggtccctgag
caacagcccattactttgtgtagtggagttgaagacacaaagcattatgaggaagcaaag
aaatgtgtagaagaattagcattgtacctgaaaccactcagtagtgctagaggggtgggt
ctgaatagcactactcagagtgtcttgagtcgcccaatgcagaggaagctggtaactctc
gtccactgccaattggtggaagaagaaggcaggattcgtgccatgagggctgctcgatct
ttaggtgaacgaacagttacagaactcattctccagcaccagaatcctcagcaactctct
tccaatctttgggcagcagttcgggcaaggggctgtcagtttcttggaccagcaatgcag
gaagaagctctaaagctggttctcctggccttagaggatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttggagccacggtttccacaagcctctaaaact
agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaggaagaatttagaacctatgaagctctgcgg
cgagaacatgattcccagatagtacagattgctatggaagctggtttacgaattgcacca
gaccaatggtcctctttgctttatggagaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagaccccagcctcttttgcgcaaagtgttcaggaactaacaattgct
ctccagcggactggagatccagcaaacttgaaccgactaagaccccatttggagttacta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctggaaaatggg
cttgttgctgtgcgcacagtggtacacgggctcgttgattatatccagaatcacagcaaa
aaaggagcagatcagcagcagcctccacagcatagcaaatacaaaacatacatgtgtcga
gatatgaagcagagaggaggatgtcctcgtggagccagctgtacatttgcacactcacag
gaggaactggaaaaatttcgtaaaatgaacaaacgcctggttcccagaagaccgctgagt
gcctctttgggccaacttaatgaggtgggcctgccttcagcaactatccttccagaagaa
ggtgcagtggatctgccaagcagaaaacctcctgctctgccaaatggaattgtttcagca
gggaatacagtaacacagctgattccacgagggacagaccccagctatgattctagtctg
aaaccaggaaagatagatcatctgagcagtagtgctcctggatcccctcctgacatgcta
gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg
ggtccagcagacctgcctcctatgcctgtcaccaaaccacttcagatggtaccacgaggt
tctcagttatatccagcacaacaggcagatgtttactatcaggatcctcgaggagctgcc
ccaccatttgatccagcaccttatcagcagggtgtgtactacactccaccaccgcagtgt
gtgtcccgctttgtcagacctccaccatctgctgctgaacctggtcccccatacttggat
cattatcctccttacctccaagatcgtgtagtgaactctcagtatggcacacagccacaa
cagtaccctcctatgtacccaccacactacgacggccgccgagtataccctgctcagtct
tacgcaagagaggagattttccgagaaagtcctatacccattgagattccacctgcagca
gtaccatcctatgtaccagaagccagagaaagataccaacagatggagggttactatcca
gtggctcctcatccaactcagatcagaccttcatatatcagagagcctccttacagccgg
cttcctcctccccctcagccccatcctagtctagatgagctacatcgcagacgaaaggaa
ataatggcccaactagaggaaaggaaggttatttctccacctccttttgcaccttcacca
acgttgcctcctaccttccatcaagaggaatttttagatgaagatttgaaggtaactggg
aaatacaaaggaaatgactacagccagtactctccctggtcatgtgacaccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagagagcaacgattggatcttcatagaagagcagca
gaaaccagtgatgatgacctcatcccatttggagaccgaccaacagtatctcggtttggt
gccatctctcgaacttctaaaacaatatatcagggtgctggccctatgcaggctatggca
cctcagggagctcccacaaaatctattaacatttcagattatggtccatatggaacccat
ggtggctggggaggttctccatattcacctcatcaaaacatagcttctcagggacacttc
agtgagagggagagaatatccatgtcagaagtggccagtcatggaaaacccctcccatct
gctgagagggaacagctacgtctagaattgcagcaactaaaccaccaaattagccaacag
acccagctacgtggagtagaggctgttagtaacaggctggtgttgcagagggaggcgaac
gccctggcaggccagtcacagcccacaccaccacctccaaaatggcctggaatgatctcc
agtgagcagttgagcttggaactacaccaggtggaaagggaaatcgggaagagaacccgg
gaactgagtatggagaatcagtgttctttggacatgaaaagcaaattaaatacaagtaag
caagcagaaaatggacaaccagaaccacaaagtaaggttccagctgaggaccttacattg
acattcagtgatgtaccgaatggatcaaacttgacacaagagaatatcagcctcctgtcc
aacaagaccagctctttgaccctatcagaggaccctgagggaggagaggacaacagtgac
tcccagagatcaggagttaaatccagctgtgctccttag
DBGET
integrated database retrieval system
