Manis javanica (Malayan pangolin): 108405879
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Entry
108405879 CDS
T06054
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjv03021
]
108405879 (TAF1B)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
108405879 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
108405879
NCBI-ProteinID:
XP_036882405
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MDLEETKEFKERCTQCASVSWGLTDEGKYYCTSCHNVTERSKEVINTEAIPNTQLKSINR
GLKRKRKLEKGWDWYVCEGFQHILYQQAEALKTLGVSPELKDEVLHNFWKRYLQKSKQAY
CKDPVYTSRRKATVSEDNLSQSDWESEPQLLSDFSYPPLVESGAESQSDIHTQKSFLFSK
ASQSETLSICSGSLDGVEYSLRKEKGIVKMTVPRTLAFCYLSLLWQRETITLSDLLRFVE
EDHIPYLNAFQRFPEEMKLYGRDKGIFAIESWPNYMDIYKKTIEIATFLDLPRFPDITED
CFLHPNILCMKYLMEVNLPDEMHNLTCQVVKMTGIGEVDFLTFDPIAKMAKTVKYDVQAV
AIIVVVLKLLFLLDDNLEWSLSNIAEKYNKKNKEDKPWFDFRKWYHVMKKSIDEKKQKWE
EARAKYFWKSEKPVYHSSIDRSVVYKRREMVVNLQKQFSTLVDSAPTVEKKSPSSFQFNW
TEEDTDRICFHGHSLQGVLQKKGQSLTTRNALYWLSTQKFCKSYCKHVTTYEESNFSLSY
QFILNLFSFLLRIKTSFLHEEVSLIEKRLFKAKYKKKKVKPSRSRKVRKYCEK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaggagacgaaagagttcaaagaacgatgtactcagtgcgcttcagtctct
tgggggcttactgatgaaggcaaatattattgcacttcttgccataatgttacagaaaga
tctaaggaagttataaacactgaggccattcctaatactcaactaaaatccatcaaccgg
ggacttaaaagaaaaagaaaacttgagaaaggctgggattggtatgtgtgtgaaggtttt
cagcacatactttaccaacaagcagaagccttaaagacccttggagtaagcccagaatta
aaggatgaagttttacataatttctggaagcgctaccttcagaagagcaagcaggcctac
tgtaaagatccagtgtataccagtagaagaaaagctacagtatcagaagataatctaagt
caatcagattgggagagtgagcctcagctgttaagtgacttcagctatcctcctttagtt
gaaagtggggcagagtctcagtctgatatccacactcagaagtctttcctcttcagtaaa
gcatcacaatcagaaacattatccatctgttctggatctcttgatggagtcgaatattca
ctacgaaaggagaagggaattgtaaagatgactgtgccaaggacacttgctttctgctac
ctgtcattactttggcagagagagacaattacactttcagatcttttgcgatttgtagaa
gaggaccatattccttacctaaatgcttttcagcgttttccagaagagatgaaattatat
gggcgtgacaaaggaatctttgctatagagtcttggcctaactatatggatatctataaa
aaaactattgaaattgccacatttttagatctgccacgttttccagacataactgaagac
tgctttcttcatccaaacatcttgtgtatgaaatacttgatggaagtcaatctccctgat
gaaatgcacaacttaacctgtcaagtggtaaaaatgactggaataggagaagtggatttt
ctgacattcgatcctatagctaaaatggcaaaaactgttaaatacgacgtacaagctgta
gctatcattgtagtagtactgaaattactctttttattggatgataatttggagtggtct
ttgtctaatattgctgagaaatataataaaaagaacaaagaagataaaccatggtttgat
ttcagaaaatggtaccatgttatgaagaaatctattgatgagaaaaaacaaaaatgggaa
gaagcccgtgcaaagtatttttggaaaagcgaaaagccagtgtaccactcatccattgac
agatcagtagtttataaaagaagagaaatggtggtgaatctacaaaaacagtttagcaca
ctggttgactcagcaccaactgttgaaaaaaaaagcccttctagttttcagttcaactgg
actgaagaagacactgatagaatttgcttccacggccatagcctccagggagtcctgcag
aagaaaggccagtcactgacaaccaggaatgcactgtactggctcagcacacagaagttc
tgtaaaagctattgtaaacatgtgacaacctatgaagaatcaaatttctctctgagttat
cagttcatactaaatctcttctccttcctgctaagaataaagacttcctttcttcatgaa
gaagtgagcttaattgaaaagagactttttaaagcaaaatacaaaaaaaaaaaagtgaaa
ccttcaagatccaggaaagtgagaaaatactgtgaaaaatga
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