Manis javanica (Malayan pangolin): 108406017
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Entry
108406017 CDS
T06054
Symbol
DDX49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49 isoform X1
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mjv03009
]
108406017 (DDX49)
Enzymes [BR:
mjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108406017 (DDX49)
Ribosome biogenesis [BR:
mjv03009
]
Eukaryotic type
90S particles
Helicases
108406017 (DDX49)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
108406017
NCBI-ProteinID:
XP_017529983
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MAGFAELGLSSWLVEQCRQLGLKQPTPVQMGCIPVILEGRDCLGCAKTGSGKTAAFVLPI
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRK
PHVVIATPGRLADHLRSSSTFSIKKIHFLVLQVMDEADRLLEQGCTDFTVDLEAILAAVP
ARRQTLLFSATLTDTLRELRGLAANQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVH
LIQNFQDEHEDWSIIIFTNTCKTCQILCMLLRKFNFPAVALHSMMKQKERFAALAKFKSS
ICRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDI
HLVHAIEEQISPKFLLSGYQNKLPTVARCSWRPYPGPHCVAKHPLPVVSTLPCTPPEKKL
DEFSVEEDGVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQLILEGKDPDLEAKRKA
ELAKIKQKNWRFKEKVEQALQRQKAGGAGRRGCRPRAQREDHPAPAPT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggccgggttcgcggagctcgggctgtcatcgtggctggtggaacaatgtcggcagctg
ggtttgaagcagcccacgcccgtacagatgggatgtatccccgtcatcctggagggtcgg
gattgcttgggctgtgccaagacaggcagcgggaagacagcagcgtttgtcctgcccatc
ttgcagaagctgtctgaagacccctatggcatcttctgcctcgtcctgacacccaccagg
gagctggcctaccaaatcgcagagcagttccgggtcctggggaagcctctgggcctgaaa
gactgcatcattgtcggcggcatggacatggtgacccaggctcttgagctttcccggaaa
ccacacgtggtcattgccaccccaggacgcttggctgaccacctccgcagctccagtacc
ttcagcataaagaaaattcacttcctggtgctgcaggtgatggatgaggccgaccggctc
ctggagcagggctgcactgacttcactgtggacctggaggccatcctggcagctgtgcca
gcccgcaggcagacgctgctcttcagcgccactctgactgacacactccgggagcttcgg
ggcctggctgctaaccagcccttcttctgggaagctcaggctccggtgcgcacagtggaa
cagctggaccagcgctacctgctggtgcccgagaaggtcaaggatgcctacctggttcac
ctaatccagaacttccaggatgagcacgaggactggtccatcatcatcttcactaacaca
tgcaagacctgccagatcctgtgcatgttgctgcgtaaattcaacttccccgctgtggct
ctgcattccatgatgaaacagaaagaacgctttgctgccctggccaagttcaagtccagt
atctgcaggatcctgattgcgacagatgtggcctcacggggcctggacattcccactgtg
caggtggtcatcaaccacaacacccctgggctcccaaagatttatatccaccgagtcggc
cggacggcccgtgcggggcgccaaggacaggccatcacactggtgacgcagtatgacatc
cacctggtacatgccatcgaggagcagatcagcccgaagtttcttttgtctggttatcag
aacaagctccccacagtggcccgctgcagctggaggccatatccgggacctcactgtgtg
gctaaacaccctctccctgtcgtgtccaccctcccctgcacccccccagagaagaagctg
gacgaattctcagtggaggaggacggggtgctgcagattctcacacaggtcaatgtggtg
cggagagagtgcgagattaaactggaggcagccaactttgatgaaaagaaggaaatcaat
aagcggaagcagctgatcctggagggaaaggaccctgacctggaggccaagcgcaaggcc
gagctggccaaaatcaagcagaagaactggcgcttcaaggaaaaggtagagcaggctctg
cagcggcagaaggccggtggggctggccgcagggggtgtcggcccagggcccagcgtgag
gaccacccggccccagcacccacctag
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