Manis javanica (Malayan pangolin): 108406389
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Entry
108406389 CDS
T06054
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108406389 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108406389 (PRPF38B)
Spliceosome [BR:
mjv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108406389 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
108406389 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
108406389
NCBI-ProteinID:
XP_017530572
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGTAKPAVSGKQGNVLPLWGNEKTMNLNP
MILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVG
TGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFES
FLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKI
KKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKE
RQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKEN
ERGRRRDRDYDKERGNDREKERERSKERRSRGEVEDKKHKEDKDDRRHRDDKKDSKKEKR
HSRSRSRERKHRSRSRSRNAGKRSRSRSKEKPSKHKNDSKEKPNKRSRSGSQGRTDSVEK
ARKREHSPSKEKSRKRSRSKDRSHKRDHSDSKDQSDKHDRRRSPSIEPESQEKQHKNKEE
TP
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccacagcaccaggcggccgcg
gccgcggcccagcagcagcagcagtgcggcggcggcggcaccgcgaagcctgcggtctcg
ggcaagcagggcaatgtgctgccgctgtggggcaacgagaagactatgaacctcaacccc
atgatcctgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgagctcaag
acctaccacgaggtagtggacgagatctactttaaggtcacacatgttgaaccatgggag
aaaggaagcaggaaaacggcaggccaaacagggatgtgcggaggggttcgaggtgttgga
acaggaggaattgtttctacagctttttgcttgttatacaaattatttactctaaagtta
actcgcaagcaagtgatgggtctcataacgcacacagactctccatatattagagccctt
ggatttatgtatataaggtacacacagccccctacagatctgtgggattggtttgaatcc
ttccttgatgatgaagaggacctagatgtgaaagctggtggaggctgtgtaatgaccatt
ggagaaatgctccggtcttttctcacaaaactggagtggttttctaccctgttcccaaga
attcctgttccagttcagaagaatattgatcagcagattaaaacccggcctagaaaaatc
aagaaagatgggaaggaaggtgctgaggaaatagacagacatgttgaacgtagacgttca
aggtctcccaggagatcactgagtccacggaggtccccaagaagatcaagaagtagaagc
catcatcgggagggccatgggtcttctagttttgaccgagaattagaaagagagaaagaa
cgccagcgactagagcgtgaagccaaagaaagggagaaagaaaggcgaagatctcgaagt
attgatcggggcttggaacggaggcgtagcaggagtagagaaaggcatagaagtcgtagt
cgaagtcgtgataggaagggggatagaagggacagggatcgggaaagagagaaagaaaat
gaaagaggtagaagacgagatcgagactatgacaaggaaagaggtaatgaccgagaaaag
gagagagaacggtctaaggaacggcgaagtaggggtgaggtagaagacaagaaacataaa
gaagacaaagatgataggcggcacagagatgacaaaaaagattccaagaaagagaaaagg
cacagcagaagtagaagcagagaaaggaagcacagaagcagaagcagaagcagaaatgca
gggaaaagaagtagaagcaggagcaaagaaaaaccaagtaaacataaaaatgacagtaaa
gaaaaaccaaacaagcgaagtcgaagtggcagtcaaggaagaactgacagtgttgagaaa
gcaagaaaacgggaacacagccccagcaaagaaaaatctagaaagcgtagcagaagcaaa
gaccgttcccacaaacgagatcacagtgatagtaaggaccagtctgacaaacatgatcgc
cgaaggagcccaagtatagaaccagagagccaagaaaaacagcataaaaacaaagaggag
actccgtga
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