Manis javanica (Malayan pangolin): 108406535
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Entry
108406535 CDS
T06054
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03082
ATP-dependent chromatin remodeling
mjv04714
Thermogenesis
mjv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108406535 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
108406535 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
108406535 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjv03021
]
108406535 (SMARCD1)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108406535 (SMARCD1)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108406535 (SMARCD1)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108406535 (SMARCD1)
PBAF complex
108406535 (SMARCD1)
GBAF(ncBAF) complex
108406535 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
108406535
NCBI-ProteinID:
XP_017530766
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGTGASGGAGTAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGILPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgggcgggtttccagtctgtggctccaagcggcggcactggggcctctgga
ggggctggcacggcagctgccttgggcccgggcgggactccggggcctcccgtgcgaatg
ggcccggcgccgggtcaaggtctataccgctccccgatgcccggagcggcctatccgaga
ccaggtatactgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccggcctggcctggcccaatcagggatggaccagtcccgc
aagagacctgcgcctcagcagatccagcaggtccagcagcaggcggtccagaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcagaggattcgtgaactg
gtcccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgctgaggatggg
gaagggacagtggcttcctgggaacttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccaccaaacaaaaaaggaagttctcttcctttttcaagtccttg
gtgattgaactggacaaagacctctatgggccagacaaccatctggtggaatggcacagg
accgccactacccaggagacagatggcttccaggtgaagcgaccaggagatgtgaatgta
cggtgtactgtcctactgatgctggattaccagcctccccagtttaaattagaccctcgt
ctcgctcggctcctgggcatccacacccagacccgtccagtgatcatccaagcactgtgg
caatatattaagacacataagctccaggaccctcatgagcgggagtttgtcatctgtgac
aagtacctccagcagatctttgagtctcaacgtatgaagttttcagagatcccccaacgg
ctccacgccttgcttatgccaccagagcccatcatcattaaccacgtcatcagtgttgat
ccaaatgatcagaagaagactgcttgttacgacattgatgtggaagtggatgataccttg
aagacccagatgaattcttttctgctgtctactgccagccagcaggagatcgctactcta
gacaacaagattcatgagactatagaaactatcaatcagctgaagacccagcgggagttc
atgctgagctttgccagagatcctcagggtttcatcaatgattggcttcagtcccagtgc
cgggacctcaagaccatgactgatgtggtgggcaacccagaagaagagcgccgagctgag
ttctacttccagccttgggctcaggaggctgtatgccgatacttttactccaaggtgcag
cagagacgacaagaattagagcaagccctggggatccgaaatacatag
DBGET
integrated database retrieval system
