Manis javanica (Malayan pangolin): 108406673
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Entry
108406673 CDS
T06054
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04151
PI3K-Akt signaling pathway
mjv04510
Focal adhesion
mjv04512
ECM-receptor interaction
mjv04820
Cytoskeleton in muscle cells
mjv04974
Protein digestion and absorption
mjv05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108406673
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108406673
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108406673
09142 Cell motility
04820 Cytoskeleton in muscle cells
108406673
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
108406673
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
108406673
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mjv04147
]
108406673
00536 Glycosaminoglycan binding proteins [BR:
mjv00536
]
108406673
Exosome [BR:
mjv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108406673
Glycosaminoglycan binding proteins [BR:
mjv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108406673
Hyaluronan
Extracellular matrix or blood plasma proteins
108406673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Radical_SAM
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
108406673
NCBI-ProteinID:
XP_017530990
LinkDB
All DBs
Position
Unknown
AA seq
2273 aa
AA seq
DB search
MKMLLILFLIIICSHVSVNQDAGPEYADVVFLVDSSDHLGTKSFPFVKMFINKMISSLPI
DTNKYRVALAQYSDMLHTEFQLDTFRSRNPMLNHIRKNFGFLGGSLRIGNALQQVHRTYF
SGPASRRDKKQFPPILVVLASAESEDDVEEASKALQRDGVRIISVGMQRASEENLKTMAT
AQFHFNLRTARDLIMFSHNMTQIIRDAAQHREGAANDTLVKGCQGPSVADVVFLLDVSIN
GSQENFDYLKEFLEESVSALDIKENCMRISLVAYSNETKVINSLSRGINKSEVLQYIQNL
SPQIGKAYTGAALRRTRKEIFSARNGSRKNQGVPQIAVLVTHRPSEDNVTKAAANLRREG
VTIFTMGIEGASNPQLGKIASHPAEQYVSRLKTFSDLAAHNQTFLKKLRNQITHTVSVFS
EWTETLKSGCVDTEEADIYLLIDGSGSTQATDFQEMKTFLSEVVGMFNIAPQKVRVGAVQ
YADNWDLEFEINKYSNKHDLGKAIENIRQMGGNTNTGAALNYTLRLLQKAKKQRGNRVPC
HLVVLTNGMSKDSILEPARRLREELIHVYAIGVKEANQTQLREIAGMEKRVYYVHDFDSL
KDIRNQVVQEICAEEACKNMKADIMFLVDSSGSIGLENFVKMKTFMKNLVSKSQIGADRV
QIGVVQFSDINKEEFQLNRYVSQSEISEAIDQMGHIGETTLTGSALTFVSQYFSPAKGSR
PNVRKFLILITDGEAQDIVKDPAVTLRQEGVIIYSVGVFGSNVTQLEEISGRPEMVFYVE
NFDILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDSDEYNIMKEFMIDLVKKA
NVGKNQVQFGALKYADDPEVLFYLDDLGTKQEVISVLQNDQPMGGNTYTAEALGFSEHMF
MEARGSRLHKGVPQVLVVITDGESHDADKLNATAKALRDKGILVLAVGIAGANPVELLAM
AGSGDKYFFVETFGGLKGIFSNVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFKKM
KEFLASIVQDFDVSANRVRVGVAQFSHTYQPEFHLGNFIGQKEISFQIESIQQIFGYTHI
GAALWQVGHYFRPDMGSRIQAGAPQVLLVLTDGRSQDEVAQAAENLRRKGVDIYSVGIGD
VDDQQLVQITGTADKKLTVDNFDELRKVRKRIVRSICTSGGGSNCFVDVVVGFDVSTHEN
GQTLLEGQSWIETYLQDILHAISSLNGVSCEVGTETHVSVAFQVTNAIEKYSPKFEIYSE
NILHSLKDVIVKGPSLLNANLLSSLWDAFQNKSAARGKVVLLFSDGLDDDIEKLEQKSGE
LRKEGLNALITVALDGASASGDLADLLYIEFGKGFAYRTQLTIGMRDLGSRLSRQLVNVA
ERTCCCLFCKCIGGDGTLGEPGAPGKKGPPGFKGSEGYLGEEGIAGERGATGPAGEQGAK
GCHGARGPKGNRGLNGQEGEVGESGIDGLNGEQGDSGLPGGKGSKGDEGSQGSPGKKGMS
GDHGTKGLRGDPGVPGLDNSIQGPKGLTGDRGRQGRRGWPGPPGTPGSRRKMAAHGRRGH
TGPQGKTGIPGPEGLEGSPGLTGPQGPRGEAGVKGEKGDLGSRGPQGPPGPGGEAGTQGH
LGSQGNKGEPGAPGSKGALGLPGPRGLPGDDGHPGYGSFGSKGAKGQEGFPGESGAKGEI
GGPGGLGETGPQGARGQTVSTGLPGEMGFPGEPGPAGRKGVKGAKGLTSFSACELTQFVR
DHSPGRHGKPECPVHPTELVFALDQSRDVTKQEFERMKEMVSSLVRGVRVRESSCPVGAR
IAILSYGSHARHLIRFSDAYKKSQLLREIEAIPYERSSDSREIGKVMRFISRNVFKRTLP
GAHARRIATFFSSGQSADVHSITTASMEFSALDIVPVVIAFSNVPSIKRAFAIDDTGSFQ
VIMVPPGADYTPALERLQRCTFCYDACNPDSFCNQATPPPSVQSYMDAAFLLDSSQHVGS
AEFEDIRGFLGALLDHFEVSPEPKTSVTGDRVALLSHAPPNFLPNTQKSPVRTEFNLTTY
NSKHLMKRHVEESVQPLSGDAFIGHALQWTVDNIFLSTPNLRRNKVIFVISAGETSHLDR
ETLKKESLRAKCQGYALFVFSLGPAWNDKELEELASSPLDHHLVQLGRVHKPDHKYGVKF
VKSFINSVRRTINKYPPITFKTKCNRLSSTDPKQPPQQLQSFAPGPHKAALKEDTLQKAK
FFQDNKYLSRVVRGSRDGTVQNFTRNIFHTFKNGKQVIKTAPKQHDKGHAQRI
NT seq
6822 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgctgctgattttgttcctcataataatttgttcccatgtttctgtgaaccaa
gatgctggtcctgagtatgcagacgtggtgtttctggtggacagctctgatcacctggga
actaagtccttcccttttgtaaaaatgtttatcaacaaaatgatcagcagtcttcccata
gacaccaacaaataccgcgtggccctggcccagtacagtgacatgctccacactgagttc
cagctggacaccttcaggagcaggaaccccatgttgaaccacatcaggaagaactttggg
ttcctaggtggctccctgaggatagggaatgctctccagcaggttcacaggacctatttc
tctgggcccgcaagcaggagagacaagaaacagttccccccaattttggtggtcctggct
tcagccgagtctgaggatgacgtggaagaggcttccaaggccctgcagagagacggggtg
agaatcatctctgttgggatgcagagggcatcggaggagaacctgaagaccatggccaca
gctcagttccatttcaacctccggacggccagagacctcatcatgttttcccataacatg
acgcaaatcatcagggatgcagcccagcacagggaaggagcagccaatgacactcttgta
aaagggtgccaaggcccgtcagtggctgatgtggtgttcctgctggatgtgtcaattaat
ggcagccaggagaactttgattatcttaaagaattcctggaagaaagtgtgtctgccctt
gacataaaggaaaactgcatgaggatcagccttgtggcttacagcaatgagacaaaggtg
ataaattcactgagcaggggcatcaataagtcagaggttctccagtatatacagaacctc
tctccccagatcgggaaggcctacacgggagctgctctcagaaggactaggaaggagatc
ttcagtgcacgaaatggcagtaggaagaatcagggggtgccccagatcgccgtgctggtg
acccacagaccctcagaggacaacgtgaccaaggcagccgctaacctccggcgtgagggc
gtgaccatcttcaccatgggcatagagggggccagcaacccccagctgggaaagatagca
tctcatcctgccgagcagtatgtctccaggctgaaaaccttctccgacctggctgctcac
aaccagacatttctgaagaagctgcggaaccaaataacgcacacagtctccgtcttttcg
gaatggaccgaaacactcaaatccggttgtgtggacacagaagaagcagacatctacctg
ctcattgatggctctgggagcacgcaggccacagacttccaagaaatgaagaccttcctg
tcagaggtcgtagggatgttcaacattgctccccaaaaagtgcgggttggggctgttcag
tacgctgacaactgggacttggaatttgagatcaataaatactctaacaagcacgatttg
ggaaaggccattgagaacatcaggcagatgggtgggaacacaaacacaggtgcagccctg
aattacacactgaggctattgcaaaaagcaaagaagcagcgaggaaacagagtgccatgt
catcttgttgtcctgacgaatggcatgtccaaggacagcatcttggagcctgcaagaaga
ctgagagaagagctcatccacgtttatgccattggggtgaaggaggccaaccaaacacag
ctgcgagaaattgctggcatggaaaagagggtgtactacgtgcatgactttgattctctg
aaagacattagaaaccaagttgttcaagaaatctgtgctgaagaagcctgcaaaaacatg
aaagctgacattatgtttctggtggacagttctggcagtataggacttgaaaacttcgtc
aaaatgaaaacatttatgaaaaacctggtgagcaaatcccagattggggcagatcgggta
caaattggcgtagtccagttcagcgacatcaacaaggaggagtttcagctcaacagatac
gtgtcccaaagtgaaatttcagaggcaatagaccaaatgggtcacattggggaaaccacc
ttgacgggtagcgctctgacgtttgtttctcagtacttcagccccgccaaggggtcccgg
cccaacgtcaggaagtttctcatcctcatcacagatggtgaagctcaggacatagtcaag
gacccagcagtaacacttcggcaagaaggtgtaattatctactctgtgggggtgtttggc
tccaatgtcacccagctggaggagatcagtgggaggccagagatggttttttatgttgag
aattttgacattctgcagcacatcgaagatgacctcgtttttgggatatgcagcccccgc
gaagaatgcaagcggattgaagtcttggatgttgtgtttgtaattgacagctctggaagc
attgactctgatgaatataatattatgaaggaatttatgattgacttggtgaaaaaagcc
aatgttggcaagaatcaggtccagtttggggctctgaagtacgctgatgaccccgaggtg
ctattttatctggatgaccttggcacgaaacaggaggtgatatcagtgctccagaatgac
cagcccatggggggtaacacttacactgccgaggccctgggcttctcagagcacatgttc
atggaagcccggggcagtcgcctgcacaagggggtcccccaggtcctcgtggtgatcact
gacggggaatcccatgatgcggacaagctcaatgccacggccaaggccttgagggacaaa
ggcattcttgtcctggccgtggggatcgccggtgccaatcccgtggagctgctggctatg
gcagggtctggggacaagtacttcttcgtggagactttcggaggcctgaaggggatattt
tcaaatgtgtcagccagtgtgtgtaactcttcaaaagtagattgtgaaattgaaaaagta
gaccttgtgttcctcatggatggatcgaatagcattcatccagatgacttcaagaagatg
aaggaattcttggcatccattgttcaagacttcgacgtcagcgccaacagggtgcgtgta
ggagtggcccagtttagccacacctaccaaccagagtttcatctgggcaatttcataggc
caaaaggagatatcatttcagatcgaaagcatccagcagatctttgggtacacacacatc
ggcgctgccctctggcaggtggggcactacttccggccagacatgggcagccggatacag
gcaggcgccccgcaggtgctgctggtcctcacggacggccggtcccaggacgaggtggct
caggccgctgaaaacctgagacgcaaaggagttgacatttattccgtgggaatcggggat
gtggacgaccagcagctcgttcagatcaccggcactgcagacaaaaagctgacagttgat
aacttcgatgaactgaggaaggtcaggaagaggatcgttcgcagcatctgcacctccggg
ggcggcagcaattgttttgtggatgttgtagtgggatttgacgtctcaactcatgagaat
gggcagactttgctcgaaggtcagtcttggatagaaacctaccttcaagacatcttacat
gccatcagctccctcaatggggtaagctgtgaggtgggcacagagactcatgttagtgtg
gcttttcaagtgactaatgccatagaaaaatattcccccaagtttgagatctacagtgaa
aacatactgcacagcttgaaggatgtgatagttaaaggaccatctcttctcaacgcaaac
ctcttgagctctctgtgggatgcatttcagaataaatcagctgctcgaggaaaggtggtt
ctcttattttccgatggattggatgatgatattgaaaagcttgaacaaaaatctggtgaa
cttaggaaagaaggcctgaatgcccttataactgttgctctggatggagccagtgcctcg
ggcgacctggctgatcttctctacattgaatttgggaaaggattcgcgtacaggacccag
ctcactattgggatgagggatcttgggagccgactatcaaggcaactagtcaatgttgcc
gaaaggacatgctgctgtttattctgcaagtgcattggaggagatggcacactgggagag
cctggagcgccagggaagaagggaccccctggttttaaaggcagtgaaggctacctggga
gaggagggcattgctggagaaagaggagccaccggaccagcgggagagcaaggtgctaaa
gggtgccatggtgccaggggtcctaagggaaacaggggactaaatggacaggagggagaa
gttggggaaagtggaattgatggattaaatggagaacagggtgacagtggtcttcctgga
ggaaaaggatcaaagggtgatgaaggatcccagggaagcccagggaagaaaggaatgtct
ggcgaccacggaacaaagggcctgcgaggagaccctggagttcctggacttgacaatagc
atacaaggaccaaagggcttaacaggagatcgcggaagacagggtagaagaggctggcca
ggcccccctggaacaccaggctccagaagaaagatggcagctcatggccgaaggggacat
acaggtccacaggggaaaacaggcatccccggcccagagggactcgaaggctcaccggga
ctgacaggccctcagggcccaagaggagaggctggtgtgaaaggggagaaaggcgatctg
ggaagtagaggtcctcagggacctccaggaccaggaggagaggcagggactcaaggccac
ttgggaagccaaggaaataaaggagaacctggagctccgggaagcaaaggagctcttggc
ctgcctggtccccgaggcttgccgggggacgatggccacccgggttatggcagctttgga
agtaaaggagcaaaggggcaagaaggattccctggagaaagtggagctaagggtgagatt
gggggcccaggtggcctaggagaaactggaccccagggggcaagaggccagacggtatcc
actgggcttccaggagagatgggattccccggagagccaggacctgctgggcgcaagggt
gtgaaaggggccaaaggattgacttcgttttctgcatgtgagctcactcagtttgtacgg
gaccacagtcccggcagacacggaaagccagaatgcccagtgcaccctacggagctggtg
tttgccttagaccagtcccgggatgtcacgaagcaagaatttgagcggatgaaggagatg
gtgtcttccctggtgaggggcgtccgggtccgggagagcagctgccctgtgggcgcgcgc
atcgccatcctctcctacggctcccacgccaggcacctcatccgcttctcggacgcctac
aagaagagccagcttctcagggagattgaagctattccttacgagagatcctcagacagc
agggagatcggcaaagtcatgaggtttatttccaggaatgttttcaagcgcacgcttcca
ggggcccacgcgagaagaattgccacgttcttcagcagtggtcaatctgccgatgtccac
tccatcaccacggcctccatggaattcagtgcccttgacattgtcccggtggtgattgct
ttcagcaatgtgccctccatcaagcgtgcgtttgcgattgacgacacgggctcattccag
gtgatcatggttccgcctggggctgactacacgcctgcactagagaggctccagcggtgc
actttctgctacgatgcatgtaacccggattctttctgcaaccaagccaccccaccacct
tctgtacagtcctacatggatgctgctttccttctggacagctcccaacatgtgggaagt
gccgaatttgaagacataagaggcttcctgggagcactgttagatcactttgaagtcagc
ccagagcccaagacctctgtcactggagaccgggtggccctattaagccatgctcccccc
aacttcctacccaacactcagaagagtcctgttagaaccgagttcaaccttaccacctac
aacagtaaacacctcatgaagaggcatgtggaagaatcagtccaaccactaagtggagat
gcctttatcggccatgccttgcagtggactgtggacaatatcttcttaagtacacccaat
ctgagaagaaacaaagtcatatttgtgatatctgctggggaaaccagtcacttggacagg
gaaactttaaagaaagaatccttgagagccaagtgccaaggctatgccctgttcgtgttt
tccttgggccctgcctggaatgacaaggagctggaggagctagccagcagccctttggac
catcacttggtccagcttggccgagttcataaacctgaccacaaatatggtgtgaagttt
gtgaagtcctttataaactccgtcaggcgtacaatcaacaaatatccaccaataaccttc
aaaaccaagtgcaacagactcagctccacagacccaaagcagcccccacagcagctacaa
agctttgctcctggaccacataaagcagccctcaaagaagacacattacagaaggcaaaa
ttctttcaagacaacaagtatctttcaagagtagtaagaggcagccgagatggtactgtt
caaaattttaccagaaacatattccatacctttaaaaatggaaaacaggtgataaaaact
gctcccaaacaacatgataaaggacatgctcaaagaatttag
DBGET
integrated database retrieval system
