KEGG   Manis javanica (Malayan pangolin): 108406916
Entry
108406916         CDS       T06054                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    108406916 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mjv03400]
    108406916 (WDR48)
DNA repair and recombination proteins [BR:mjv03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     108406916 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_Aladin WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_2nd WDR54 Beta-prop_DCAF4 Beta-prop_IP5PC_F WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_ACSF4 Nucleoporin_N WD40_like RAWUL Beta-prop_VPS8 Tfb2_C
Other DBs
NCBI-GeneID: 108406916
NCBI-ProteinID: XP_017531415
LinkDB
Position
15:60470089..60513008
AA seq 677 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVS
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGAQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVATTKSTVNKWTLKGIHNFRASGEYDNDCTNPVPPLCTQPDQAVIGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHVN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESV
LLNETAPQWAIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSSNEKPGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKAM
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccggcagaacacggcggggcgaaggaaggtgcaggtctcctatgtt
attcgagacgaagtggagaagtacaatagaaatggagtcaatgccctacagctggatccc
gccctcaataggcttttcaccgcaggccgagattccatcatcaggatatggagtgtcagt
cagcacaagcaagatccatatatagcctctatggaacaccacaccgattgggtaaacgac
attgtactctgttgtaatgggaaaaccttaatatctgcctcttctgacacaacagtgaaa
gtatggaatgcgcataagggattttgcatgtcaacgctaagaacacataaggattatgta
aaggccttagcatatgccaaggataaagaactggtagcatcggccgggttggacagacaa
atattcctttgggatgtgaataccctaacagccttgactgcctcaaataacactgtcaca
acttcttctttaagtgggaacaaagattccatttatagcctggcaatgaatcaactggga
acaatcattgtctcagggtccactgagaaggttttaagggtatgggatccaagaacatgt
gcaaagctcatgaagctgaaagggcacaccgataacgtaaaagcactgctgctgaacaga
gacggtgcacagtgcctttccggcagttctgatgggacgattcgcctttggtctcttggc
cagcagagatgtatagctacctaccgggtccacgatgaaggtgtttgggccctgcaggtc
aatgatgccttcacacatgtgtactctggaggaagggacaggaagatttactgtacagac
ttaagaaatcctgacattcgggtgctaatttgtgaagaaaaagcaccagttctcaagatg
gagcttgatagatcagcagatccccctcctgcaatctgggttgcaacaactaagtccacg
gtaaataaatggacgttgaagggaattcataactttagagcttctggagagtatgacaat
gactgcacaaaccctgttccacccctctgtacacaacctgaccaagctgttatagggggt
gctagtattattcagtgccacattctcaatgataagagacatatattaaccaaagatacc
aacaataatgtggcatattgggatgtattaaaggcatgtaaagttgaagatctggggaaa
gtggattttgaagatgaaattaagaaaagatttaagatggtatatgtgccaaattggttc
tcagtagacttaaaaacagggatgctgacgatcactttggatgagagtgactgctttgct
gcttgggtttctgcaaaagacgccggcttcagtagccctgatgggtcagatccaaaactg
aacttaggaggacttttactccaggcactcctagaatattggcctagaacacatgtgaat
ccaatggatgaagaagaaaatgaagtaaaccatgtaaatggggagcaggagaaccgagtg
cagaagggaaatgggtattttcaagtgcccccccacacccctgtgatcttcggtgaagct
ggaggtcgcacactgttcaggctgctgtgccgagactccgggggcgagactgagtcagtg
cttcttaacgagacggcgccgcagtgggcaattgacatcactgtggataaaaatatgccc
aaattcaacaaaattcctttctacctccaacctcatgcatcttcaggagcaaaaacctta
aaaaaagatagactttctgcgagtgacatgctccaggtccggaaagtcatggaacatgtt
tatgagaaaatcatcaacttggataatgagtctcaaaccactagctcttcaagtaatgaa
aaaccaggagaacaggaaaaagaagaagatattgctgtgctggcagaggagaaaattgaa
cttttatgccaggaccaggttttggatccaaatatggaccttcgaacagtgaaacacttc
atatggaagagtggtggtgacctcaccctgcattaccgccagaaggccatgtga

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