Manis javanica (Malayan pangolin): 108406949
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Entry
108406949 CDS
T06054
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjv03000
]
108406949 (RC3H2)
04121 Ubiquitin system [BR:
mjv04121
]
108406949 (RC3H2)
Transcription factors [BR:
mjv03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
108406949 (RC3H2)
Ubiquitin system [BR:
mjv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108406949 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
108406949
NCBI-ProteinID:
XP_017531479
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLIPRSTDSTLRALETVKKVGKVGTNGQNASGPSAE
SVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRAQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAPLVSSTLPVATQSPPPPSPLFSVDFRADFSESMSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDLKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGENDYAEDATDTKPDRDIELELSALDTDEPDGQGEQIEEILDI
QLGISSQNDQLLNGATVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFSQ
PLPVSISNASCLPITTSVSVGNLILKTRVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgatcagacggctatcaacacagac
attgatgtgcttcctgtcaactttgcactgctccagttagttggagcccaagtaccagat
catcagtcgataaaattaagtaatctaggtgagaacaaacactatgaagttgcaaagaaa
tgtgttgaggatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactagtgacacttgtaaactgt
caactggtagaggaagaaggtcgtgtacgagccatgcgagcagcccgctcacttggagaa
agaactgtaacggaactgatattacagcaccagaaccctcagcagttgtctgccaatcta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaagcc
ttgaagctggtgttgctggcactagaagatggttctgctctctcaaggaaagttctggta
ctttttgttgtgcaaagattagaaccaaggtttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttaccaaaagggatgaagac
tcttccctgatgcagctaaaggaggaatttcggagttacgaggcattacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggactccgtatttcacctgagcagtgg
tcctcacttctctatggtgacttggcacataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acgggtgacccagctaacctgaatagactgaggcctcatttagagcttcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggaacagctcgaaaatgcaatggtagct
gttaaaacagtggttcatggacttgtggacttcatacagaattatagtagaaaaggccat
gagacaccacagcctcagccaaacagcaaatataagaccagtatgtgccgagatctgcga
cagcaaggagggtgtccacgaggaacaaattgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagattaatgcaactgtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaaccacggggaaaattgttccaagtacaaatgggatttcaaatgcagaa
aacagtgtttcccagctaatcccacgtagtactgacagtacattaagagctctggagact
gtgaagaaagtggggaaggttggcactaatggtcagaatgcttctgggccttctgcagag
tccgtaactgaaaataaaattggttctccacccaagactcctgtaagtaacgtagcagct
acctcagctgggccctctaatgttggaacagagctgaattctgtgcctccaaaatccagc
ccgtttataactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaagggctcagataccctttgaagttccacagtacccacagacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccacctgcttccatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccagcctcctcctccgcagccatat
ggaccagttcctccagtaccttctggaatgtatgctcctgtgtatgatagcaggcgcatc
tggcgtccacctatgtatcaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcgtctgtctatcagacatctctgcgggaaagatataactcattagat
gggtattattcagtggcttgtcagccaccaagtgagccaaggacaactgtgcctttacca
agggaaccctgtggtcatttgaagaccagttgcgaggagcagattagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctctcgtctcttcaactcttcctgtggca
acacagtcgccgccgccgccttctcctctgttcagtgtagactttcgcgctgatttctct
gagagtatgagtggtacaaaatttgaagaagatcatctttcccattattctccctggtct
tgtggtaccataggctcctgtataaatgccatcgattcagagcccagagatgtaattgct
aattcaaatgctgtgttaatggacctggacagtggagatcttaagagaagagtgcattta
tttgaaactcagagaaggacaaaagaagaagacccaataattccttttagtgacggacct
atcatctcaaaatggggtgcaatttccagatcttcccgtacaggttaccatactacggat
cctgtccaggccactgcttcccaaggaagtgcaactaagcccatcagtgtatcagattat
gtcccttatgtcaatgctgttgattcaaggtggagttcatatggcaacgaggccacttca
tcagcacactatattgaacgggacagattcattgttactgatttatccggtcatagaaag
cattccagtactggagaccttttgagcatcgaactccagcaggccaagagtaactcactg
ctgcttcagagggaggccaatgctctggccatgcaacagaagtggaattccctggatgaa
ggccgtcaccttactttaaatcttctgagcaaggaaattgaactaagaaatggagagaat
gattatgcagaggatgcaacggatactaagcctgatagggatattgagctagagctttcg
gcacttgatactgatgaacctgatggacaaggtgaacaaattgaagagatcctggacata
cagcttggtatcagttctcagaatgatcagttgctgaatggagcaacagtggaaaatggg
catcctgtccaacagcaccaaaaggaaccactggagcagaagagacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagccag
ccactcccagtgtccattagcaatgcaagttgcctccccatcaccacatctgtcagtgtc
ggcaaccttattctgaaaactcgtgtcatgtctgaagataaaaacgactttttaaaacct
gttgcaaatgggaagatggttaacagctga
DBGET
integrated database retrieval system
