KEGG   Manis javanica (Malayan pangolin): 108407477
Entry
108407477         CDS       T06054                                 
Symbol
POLR2C
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03020  RNA polymerase
mjv03420  Nucleotide excision repair
mjv05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108407477 (POLR2C)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108407477 (POLR2C)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    108407477 (POLR2C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mjv03021]
    108407477 (POLR2C)
   03400 DNA repair and recombination proteins [BR:mjv03400]
    108407477 (POLR2C)
Transcription machinery [BR:mjv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     108407477 (POLR2C)
DNA repair and recombination proteins [BR:mjv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108407477 (POLR2C)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 108407477
NCBI-ProteinID: XP_017532343
LinkDB
Position
Unknown
AA seq 275 aa
MPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLH
DEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDL
ISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLR
PETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtatgctaaccagcccaccgtgcgaatcacggagctcaccgacgagaatgtcaag
ttcatcatcgagaatacggacctggcggtggccaattctattcggagggtcttcatcgct
gaggtgcccataatagccattgactgggttcagattgatgctaactcctcggtccttcat
gatgagttcatcgctcaccgtcttggattaatcccactcacaagtgatgacattgtggac
aagctgcagtactcccgggactgtacgtgtgaagagttctgccccgagtgctccgtggag
ttcactctcgatgtgcggtgcaatgaagaccagactcgtcacgtcacctctcgagacctc
atctccaacagcccccgggtcattccagtgacgtcccggaaccgagataatgaccccaat
gactatgtggagcaggacgacatcctcatcgtcaagctgagaaaaggccaggagctgagg
cttcgtgcctatgccaaaaagggctttggcaaggaacatgccaagtggaaccccactgcc
ggggtggcttttgaatacgatcctgacaatgccctgaggcacacagtgtaccccaagccg
gaggaatggccaaagagtgagtactccgagctggatgaggatgagtcacaggctccctat
gaccccaatggcaagccagagaggttttactacaacgtggagtcctgtggctctctgcgc
ccggagaccattgtcctctcagccctctccggattgaagaagaagctgagtgacttacag
acccagctaagccacgagatccagagtgatgtcctaaccataaactag

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