Manis javanica (Malayan pangolin): 108407545
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Entry
108407545 CDS
T06054
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108407545 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mjv04121
]
108407545 (HERC4)
Enzymes [BR:
mjv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108407545 (HERC4)
Ubiquitin system [BR:
mjv04121
]
Ubiquitin ligases (E3)
HECT type E3
108407545 (HERC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
HECT
RCC1
RCC1_2
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
108407545
NCBI-ProteinID:
XP_073097065
LinkDB
All DBs
Position
7:47811065..47947654
Genome browser
AA seq
1057 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEVVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG
PEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS
PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPVIDSEE
YFCVKRIFSGGDQSFSHYSNPQNCGPPDDFRCPDPSKQIWTLNETLIQKWLSYPSGRFPV
EIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLENWWSVLEPPLFLKIVELYKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEIL
HRVNEKTGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGVDVNHGLTELADIPVTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKKKPSLDDLKELMPD
VGRSMQQLLDYPEDDVEEAFCLNFTITVENFGATEVKELILNGADTAVNKQNRQEFVDAY
VDYIFSKSVASLFDAFHAGFHKVCGGKVLQLFQPNELQAMVIGNTNYDWKELEKNTEYKG
EYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQSTGGGEEYLP
VSHTCFNLLDLPKYTEKETLRSKLIQAIDHNEGFSLI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgttggggaaatgcatcttttggacagctaggtttgggtggaattgatgaagaa
gttgtgctagaacccagaaaaagtgacttttttataaataaaaaagtccgagatgtaggg
tgtggactcagacatactgtatttgttctggatgatggaactgtgtacacatgtggatgt
aatgatctaggacagctaggtcatgaaaaatccagaaagaaaccagagcaggttgttgcc
ctggatgcccaaaatatcgtagctgtttcatgtggagaagctcatacgttagcactaaat
gacaagggccaggtgtatgcttggggtctcgattctgatggacaacttggcctgctagga
ccagaggaatgtatcagagtacccagaaatattaaaagtttgtcagatatccaaatagta
caggttgcgtgtggttactatcattcacttgcactttctaaagcaagtgaagtcttctgt
tggggacagaataaatatggccaattgggtttaggcattgactgtaaaaagcaagcttca
ccacagctgattaagtctttgcttggaatccctttcatgcaagttgcagctggaggagcc
catagttttgtcctcaccctttctggagctatctttggatggggacgcaacaaatttggt
caactaggtcttaatgatgaaaatgataggtatgttcctaatttactaaagtcattaaga
actcagaaaatagtttatatttgttgtggagaagatcacactgctgcactaaccaaggaa
ggtggagtgtttacttttggagctggagggtatggccagttgggtcataactctaccagt
catgaaataaacccaaggaaagtttttgaacttatgggaagcattgtcactcagattgct
tgtggaaggcagcacacttctgcttttgttccttcatcaggacgaatttattcttttgga
cttggtggtaatgggcagctaggaactggttcaacaagcaacaggaaaagtccttttact
gtgaaaggaaattggttcccttataatgggcagtgtccaccagttattgattctgaagaa
tatttctgtgtaaaaagaattttctcaggtggagatcaaagcttttcacattactctaat
ccccagaactgtgggccaccagatgactttagatgtcctgatccttcaaagcagatctgg
actctgaatgaaactctaattcaaaaatggctgagctacccctctggaaggtttcctgtg
gagatagccaatgaaatagatggaacattttcttcctctggttgtctaaatggaagtttt
ttagctgttagcaatgatgatcactatagaacaggcaccaaattttcaggtgttgatatg
aatgctgctaggcttttattccacaaacttattcaacctgatcatcctcaaatatctcag
caggtggcagctagtttggaaaagaatcttattcctaaactgactagctccttacctgat
gttgaagcactgaggttttatcttactctaccagaatgtcccttgatgagtgattccaac
aatttcacaacaatagcgattccttttggtacagctcttgtgaacctagaaaaggcacca
ctgaaagtacttgaaaactggtggtcagttcttgaacctccactattcctcaagattgta
gagctttataaggaagttgtggtacatcttttgaaactctacaagatcggcattcctcct
tccgaaagaagaattttcaacagttttcttcatactgcattaaaggttttagaaatatta
catagggtaaatgagaaaactggacagattatacagtatgataaattttatatacatgaa
gtacaagaattaatagacataaggaatgattatatcaactgggtccagcagcaggcctat
ggagtggatgtcaaccatggattaactgagttggcagatatccctgttacaatttgcaca
tacccatttgtatttgatgcccaagcaaaaactactctgttacaaacagatgcagtcttg
cagatgcagatggctattgaccaggcccacagacagaatgtctcctctctttttctccca
gtgattgaatctgtgaatccctgcttaattctagtggtgcgtagagaaaatattgtggga
gatgcaatggaagtccttaggaaaacaaaaaatatagactacaaaaagccactcaaggtt
atatttgttggagaagatgctgtggatgcaggaggggtacgcaaagaatttttcttgctc
atcatgagggaattactggatcctaaatatggcatgtttaggtattatgaagattccaga
ctcatttggttttctgataagacatttgaagacagtgatctgttccatttgattggtgtt
atctgtggattagcaatttataattttactattgtggacctccatttccctttggctttg
tacaagaaattgctgaaaaagaagccatccctggatgatttgaaagaactaatgcctgat
gttgggagaagcatgcaacagttactggattatccagaagatgatgttgaggaagcattt
tgtcttaattttacgatcacagttgaaaactttggtgcaacagaagtgaaagagctgatt
ctaaatggtgcagacacagctgttaacaaacaaaatcggcaggagtttgttgatgcttat
gtggattacatattcagtaaatcagtggcttccttgtttgatgcttttcatgcgggcttt
cataaggtctgtggaggaaaagtccttcagctctttcagcctaatgaacttcaagcaatg
gttattggaaatacaaattatgattggaaggaactggaaaagaatacagaatacaaagga
gagtattgggcagaacatcctacaataaaaattttttgggaagtatttcatgaattacca
ctggaaaagaaaaaacaatttctgttatttttgacaggtagtgatcgaattcctattctt
ggtatgaagagtctaaaactagtcatccagtcaacaggaggtggtgaggagtatctccca
gtttctcatacctgttttaatcttctggatcttccaaaatacacagaaaaagaaactcta
cgctctaaactgatccaagctattgatcacaacgaaggcttcagtttaatataa
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integrated database retrieval system
