Manis javanica (Malayan pangolin): 108408071
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Entry
108408071 CDS
T06054
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
108408071 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mjv04515
]
108408071 (ROBO1)
Cell adhesion molecules [BR:
mjv04515
]
Immunoglobulin superfamily
ROBO family
108408071 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
108408071
NCBI-ProteinID:
XP_036868545
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MKWKYVPFLVIISLLSLTNNHLFLAQLIPDPEDPERGNDHGTPVPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKP
RDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITN
VQRSDVGYYICQTLNVAGSITTKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCV
ATGSPGPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAKLGDTGRYTCIASTPSGEATWS
AYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIE
AFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDV
PPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGAN
HGELEWLVFDVKTPAKNSVVIPHLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSA
PPQSVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSV
VIPSLVPGIRYSIEVAASTGAGAGVKSEPQFIQLDSHGNPVSSEGQVSLAQQISDVVKQP
AFIAGIGAACWIVLMVFSIWLYRHRKKRDGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVS
SGGRPGLLNISEPAAQPWLADTWPNTGNNHNDCSINCCTAGNGNSDGNLTTYSRPADCIA
NYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQ
LIQSNLSNNINNGSGDASEKHWKPPGQQKPEGAPIQYNIMEQNKLNKDYRANDTIPPTIP
YNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPVHPPPHS
NSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSH
QSTATLTPSPQEELQPMLQDRPEEMGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGP
LVSDMDTDAPEEEEDEADMEVAKMQNRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSA
SEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRNFHAPQC
PRPTSPVSTDSNMSAAVIQKARPAKKQKHQPGHLRREAYADDLPPPPVPPPAIKSPTVQS
KAQLEVRPVMVPKLPSIEARTDRSSDKKGGSYKGREVLDGRQAADMRTNPGDPREAQEQQ
NDGKGRGNKAAKRDLPPAKAHPIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQR
EQANVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaagtatgttccttttttggtcataatatcactcctcagtttgaccaacaat
cacctgttcctggcacagcttatcccagaccctgaagacccagagagggggaacgaccat
gggacacccgtccccacctctgataacgatgacaattcgctgggctacacaggctcccgt
cttcgtcaggaagattttccacctcgcattgttgaacacccttcagacctaattgtctca
aaaggagaacctgcaactttgaactgtaaagccgaaggtcgccccacccccacgattgaa
tggtacaaaggcggggagagagtggagacagacaaagatgaccctcgttcacaccgaatg
ttgctgccaagtggatctttatttttcttacgtatagtacatggacgaaagagtaggcct
gatgaaggggtctatgtctgtgtagcaaggaattaccttggagaagctgtgagccacaac
gcttcgctggaggtagctatactacgggatgacttcagacagaatccttcagatgtcatg
gtggcagtgggagagcctgcagtgatggaatgccagcctcctcgaggccatcctgaaccc
accatttcatggaagaaagatggctctccactggatgataaagatgaaagaataactata
cgaggaggaaagcttatgattacttatacccgcaaaagtgatgctggcaaatacgtttgt
gttgggaccaacatggttggggaacgtgagagtgaagtggcagagctaacagttttggag
agaccatcgtttgtgaagagaccaagtaacttggcagtaactgtggatgacagcgcggag
tttaagtgtgaggcccgaggggaccctgtgcctacagtgcggtggagaaaggatgatgga
gaactgcccaaatccagatatgaaatcagagatgatcataccttgaaaattcggaaggtg
atggctggtgacatggggtcatatacttgtgttgcagaaaatatggttggaaaagctgaa
gcgtcagccactctgactgtccaagttgggtctgaacctccacattttgttgtgaaacct
cgtgatcaggttgttgccttgggccgaactgtaacttttcagtgtgaagcaactgggaat
cctcaaccagctattttttggaggcgagaggggagtcagaatcttctattctcataccag
ccaccacaatcatccagccggttttccgtctcccagactggtgacctcactattactaat
gtccagcgatctgatgttggttattacatctgccagactttaaatgttgctggaagcatc
accacaaaagcatatttggaagttactgatgtgattgcagaccggcctcccccagtcatt
cgacaaggtcctgtgaatcagactgtagcagtggatggtactttagtgctcagctgtgtg
gccacaggcagcccaggacccacgattctgtggagaaaggatggagtccttgtttcaacc
caagattctcgaatcaaacagctggagactggcgtgctgcagatccgatacgctaagctt
ggcgacacaggccggtacacctgcatcgcatcaacccccagtggggaagcaacatggagt
gcttacattgaagttcaagaatttggagttccagttcagcctccaagacctaccgaccca
aatttaatccctagtgctccctcaaaacctgaagttacagatgtcagcagaaatacagtt
acattgtcgtggcaaccaaatttgaattcaggagcaactccaacatcttatattatagaa
gccttcagccacgcatctggtagcagctggcagaccgtagctgagaatgtgaaaacagaa
acatttgccattaaaggactcaaacctaatgcaatttaccttttccttgtgagggcagct
aatgcatatggaattagtgatccaagccagatatcagatccagtgaaaacacaagatgtt
cccccaacaagtcagggcgtggatcacaagcaagttcagagagaactgggaaatgttgta
ctgcacctccacaacccaaccatcctttcttcctcttcaattgaagtgcactggacagtg
gaccaacagtcgcagtatattcaaggatataaaattctttatcgaccatcaggagccaac
catggtgaattggagtggctagtttttgacgtgaagaccccagccaaaaacagtgttgtt
atccctcatctcaaaaagggagtcaattatgaaataaaggctcgtcctttttttaatgaa
tttcaaggagcagatagtgaaattaaatttgccaaaaccctggaagaagcacctagtgcc
ccaccccaaagtgtgactgtatcgaagaatgatggaaacggaactgcaattcttgttagt
tggcagccgcctccagaagacactcaaaatggaatggtccaagagtacaaggtttggtgt
ctgggcaatgaaactcggtatcatataaacaagacagtagacggttccaccttttctgtg
gtcattccctctctggttcctgggatccgatacagcatagaggtggcagccagtactggg
gctggggctggagtcaagagtgaaccacagttcatccagttagattctcacggaaaccct
gtgtcatctgagggccaagtcagcctcgctcagcagatctcagatgtcgtgaagcagccc
gcgttcatcgcgggcatcggggctgcctgctggattgtcctcatggtcttcagcatctgg
ctctatcggcaccggaagaagagagatgggctaactagtacttatgcaggtatcagaaaa
gtcccgtcttttaccttcacaccaacagtaacttatcagagaggaggcgaagctgtgagc
agtggagggaggccaggacttctcaacatcagtgaacctgccgctcagccgtggctggca
gacacatggccgaataccggcaacaatcacaatgactgctccatcaactgctgcacggcc
ggcaacgggaacagtgacggcaacctgactacctacagccgcccagctgattgtatagca
aattataacaaccaactggataacaaacaaacaaatctgatgctccctgagtcaactgtt
tatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagcccaaat
ctgaaggacgggcgttttgtcaatccatcagggcagcccactccctacgccaccacccag
ctaatccagtcaaacctcagcaacaacatcaacaatggcagcggggacgccagtgagaag
cactggaaaccacctggacagcagaagccagaaggggcaccaattcagtataacatcatg
gagcaaaacaaactgaacaaagattatagagcaaatgacacaattcctccaactatccca
tacaaccagtcatacgaccagaatacaggaggatcctacaacagttcagaccggggcagt
agtacatctgggagccaagggcacaagaaaggggcacggacgcccaaagtaccaaagcag
ggcggcatgaactgggcggacctgcttcctcctcccccagtgcatccacctcctcacagc
aacagtgaagagtacagtatttctgtagatgaaagctatgaccaagaaatgccatgtcct
gtgccaccagcaaggatgtatttgcaacaagatgaactagaagaggaggaagatgaacga
ggccccactcctcctgtgcgcggagcagcttcttctccagccgccgtgtcttacagtcat
cagtccactgccactctgaccccctctccacaagaagaactccagcccatgttacaggat
cgcccagaggagatgggccacatgcagcaccaacctgacaggaggcggcagccggtgagc
cctcctccaccaccacggcccatttccccaccccacacctacggctacatttcaggacct
cttgtctctgatatggatacggatgcgccagaagaggaagaggacgaggctgacatggaa
gtagctaagatgcagaacaggaggcttttgttacgtgggctggagcagacccctgcctcc
agtgttggggaccttgagagctctgtcactgggtccatgatcaatggctggggctcagcc
tcagaggaggacaacatttccagtggccgctccagtgttagctcctctgatggctccttt
ttcaccgatgccgattttgcccaggccgtggctgctgcggcagagtatgctggtctgaaa
gtggcacgtcgtcaaatgcaggatgctgctggccgccgaaattttcatgcaccccagtgc
cctagacccacaagtcctgtctctacagacagcaacatgagtgctgctgtgatacagaag
gccagaccagccaagaagcaaaaacaccagccaggacatctgcgcagagaagcctatgca
gatgatcttccgcctcctccagtgccaccacctgctataaagtcacccactgttcaatcc
aaggcacagctggaggtacggcctgtaatggtgccaaaactcccttccatagaagcaaga
acagacagatcctcagacaaaaagggaggcagttacaaggggagagaagtactggatgga
agacaagctgctgatatgcgaacaaatccaggtgatcccagagaagcacaggaacagcaa
aatgatggaaaaggacgaggaaacaaagcagcaaaacgagaccttccaccagcaaaggct
catcccatccaagaggatattctaccttactgtagacctacttttccgacatcaaataat
cccagagatcctagttcttcaagctcaatgtcatcaagaggatcaggaagcagacaaagg
gaacaagcaaatgtaggtcggagaaatattgcagaaatgcaagttcttggaggatatgaa
agaggagaagataataatgaagaattagaggaaactgaaagctga
DBGET
integrated database retrieval system